nf-core/chipseq: nf-core/chipseq v1.0.0 - Platinum Wolf

[1.0.0] - 2019-06-06 Initial release of nf-core/chipseq pipeline. Added Raw read QC (FastQC) Adapter trimming (Trim Galore!) Map and filter reads (BWA, picard, SAMtools, BEDTools, BAMTools, Pysam) Create library-size normalised bigWig tracks (BEDTools, bedGraphToBigWig) Alignment QC metrics (Preseq, picard) ChIP-seq QC metrics (deepTools, phantompeakqualtools) Call and annotate broad/narrow peaks (MACS2, HOMER) Create consensus set of peaks per antibody (BEDTools) Quantification and differential binding analysis (featureCounts, DESeq2) Collate appropriate files for genome browser visualisation (IGV) Collate and present various QC metrics (MultiQC, R