Jupyter notebooks for reproducing the analyses in the paper 'A novel independence test for somatic alterations in cancer shows that biology drives mutual exclusivity but chance explains most co-occurrence', Genome Biology 2016 17:261
Thesis: Ph. D., Harvard-MIT Program in Health Sciences and Technology, 2015.Cataloged from PDF versi...
The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility ...
<div><p>In large collections of tumor samples, it has been observed that sets of genes that are comm...
This release was used for the analyses published in the paper 'A novel independence test for somatic...
Table S1. Significantly mutually exclusive alterations found in the pan-cancer data at a maximum FDR...
In cancer, mutually exclusive or co-occurring somatic alterations across genes can suggest functiona...
Raw Data for Jupyter notebook analysis. Notebooks available here: https://github.com/KarchinLab/Tokh...
PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HT...
Somatic mutations are one of the most important factors in tumorigenesis and are the focus of most c...
Acknowledgements: J.N. is supported by a Cancer Research UK Fellowship and work in the J.N. lab is s...
Evolutionary studies usually assume that the genetic mutations are independent of each other. Howeve...
Computational tools with a balanced sensitivity and specificity in identification of candidate cance...
Data associated with article <i>Novel application of normalized pointwise mutual information (NPMI) ...
© 2020, The Author(s). The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (IC...
A recommendation of the preprint: Guillaume Achaz, Serge Gangloff, Benoit Arcangioli. The quiescent ...
Thesis: Ph. D., Harvard-MIT Program in Health Sciences and Technology, 2015.Cataloged from PDF versi...
The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility ...
<div><p>In large collections of tumor samples, it has been observed that sets of genes that are comm...
This release was used for the analyses published in the paper 'A novel independence test for somatic...
Table S1. Significantly mutually exclusive alterations found in the pan-cancer data at a maximum FDR...
In cancer, mutually exclusive or co-occurring somatic alterations across genes can suggest functiona...
Raw Data for Jupyter notebook analysis. Notebooks available here: https://github.com/KarchinLab/Tokh...
PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HT...
Somatic mutations are one of the most important factors in tumorigenesis and are the focus of most c...
Acknowledgements: J.N. is supported by a Cancer Research UK Fellowship and work in the J.N. lab is s...
Evolutionary studies usually assume that the genetic mutations are independent of each other. Howeve...
Computational tools with a balanced sensitivity and specificity in identification of candidate cance...
Data associated with article <i>Novel application of normalized pointwise mutual information (NPMI) ...
© 2020, The Author(s). The Cancer Genome Atlas (TCGA) and International Cancer Genome Consortium (IC...
A recommendation of the preprint: Guillaume Achaz, Serge Gangloff, Benoit Arcangioli. The quiescent ...
Thesis: Ph. D., Harvard-MIT Program in Health Sciences and Technology, 2015.Cataloged from PDF versi...
The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility ...
<div><p>In large collections of tumor samples, it has been observed that sets of genes that are comm...
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