0.23.0 - latest numba support and real time stats enhancements Please note that there is an API breaking change. To ensure consistency of the data when appending real time stats make sure that you make the online_analysis_interval of your MultiStateSampler object match the checkpoint_interval of your MultiStateReporter. It will error if this is not the case. Enhancements Running with NVIDIA GPUs in Exclusive Process mode now raises a warning (issue #697, PR #699) Bugfixes Fix metadata for netcdf files, specifying openmmtools for the program metadata (issue #694, PR #704). Real time statistics YAML file gets appended instead of overwritten when extending or resumimng simulations (issue #691, PR #692). Error when resuming simulations with ...
Bugfixes A bug in the multistate samplers wherelogsumexp was imported from scipy.misc (now in scipy...
What's Changed Add test to check platform precision using a string + fix error by @mikemhenry in ht...
Fix critical bug in which GPU contexts would fail to recognize mixed precision was available PR #50...
What's Changed API BREAKING: To ensure consistency of the data when appending real time stats make s...
What's Changed Bugfixes Bug in replica mixing in MPI multi-GPU runs--where some replicas were simul...
What's changed Changed behaviors LangevinDynamicsMove now uses openmm.LangevinMiddleIntegrator (a B...
Bugfixes Bug in statistical inefficiency computation where self.max_n_iterations wasn't being used ...
Bugfix Fix issue where if None was used for online_analysis_interval an error would be thrown by @m...
Bugfixes Fixed a bug in multistateanalyzer.py where a function was imported from openmmtools.utils ...
What's Changed manually casting objects to np arrays when reading checkpoint by @ijpulidos in https...
What's Changed Fix NaN-catching text in MultiStateSampler by @dwhswenson in https://github.com/chod...
New features Added support in AbsoluteAlchemicalFactory for handling multiple independent alchemica...
This release fixes several bugs and eliminates cython compiled acceleration of replica-exchange all-...
This is a bugfix release for 0.53.0. It contains the following four pull-requests which fix two crit...
0.18.1 - Bugfix release This is a minor bugfix release. New features Improvements for HostGuest* cl...
Bugfixes A bug in the multistate samplers wherelogsumexp was imported from scipy.misc (now in scipy...
What's Changed Add test to check platform precision using a string + fix error by @mikemhenry in ht...
Fix critical bug in which GPU contexts would fail to recognize mixed precision was available PR #50...
What's Changed API BREAKING: To ensure consistency of the data when appending real time stats make s...
What's Changed Bugfixes Bug in replica mixing in MPI multi-GPU runs--where some replicas were simul...
What's changed Changed behaviors LangevinDynamicsMove now uses openmm.LangevinMiddleIntegrator (a B...
Bugfixes Bug in statistical inefficiency computation where self.max_n_iterations wasn't being used ...
Bugfix Fix issue where if None was used for online_analysis_interval an error would be thrown by @m...
Bugfixes Fixed a bug in multistateanalyzer.py where a function was imported from openmmtools.utils ...
What's Changed manually casting objects to np arrays when reading checkpoint by @ijpulidos in https...
What's Changed Fix NaN-catching text in MultiStateSampler by @dwhswenson in https://github.com/chod...
New features Added support in AbsoluteAlchemicalFactory for handling multiple independent alchemica...
This release fixes several bugs and eliminates cython compiled acceleration of replica-exchange all-...
This is a bugfix release for 0.53.0. It contains the following four pull-requests which fix two crit...
0.18.1 - Bugfix release This is a minor bugfix release. New features Improvements for HostGuest* cl...
Bugfixes A bug in the multistate samplers wherelogsumexp was imported from scipy.misc (now in scipy...
What's Changed Add test to check platform precision using a string + fix error by @mikemhenry in ht...
Fix critical bug in which GPU contexts would fail to recognize mixed precision was available PR #50...