Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/78 AGKM embeddings are now the default (also avoids importing tensorflow unless user wants to use the previous gapped kmer embeddings) cap on the agkm embeddings size; reduces memory use Implementation of variable-length seqlet identification Initial implementation of exemplar-based hit-scorin
The bugfix in https://github.com/kundajelab/tfmodisco/pull/47 broke backward compatibility with some...
This release fixes bug in tensorflow backend caused due to difference in dimension ordering between ...
Changes: Compatibility with scikit-learn >= 0.22 from https://github.com/kundajelab/tfmodisco/pull/...
Added pynnd=True option to use pynn descent for coarse-grained affinity matrix computation (caveat: ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/94 Emphasis is now given to the core ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/82 Default settings for variable-len...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/61. Instead of deriving an embedding ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/83. Results should remain identical
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/63. Should fix some issues where modi...
described in more detail in https://github.com/kundajelab/tfmodisco/pull/91 The API is demonstrated ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/87 I had changed the API a bit so tha...
Corresponds to pull request https://github.com/kundajelab/tfmodisco/pull/46 Updated hit scoring str...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/45; some modifications for cutting do...
Release created at the request of people who were using an older version of TF-MoDISco. The primary ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/86 Package installation was broken b...
The bugfix in https://github.com/kundajelab/tfmodisco/pull/47 broke backward compatibility with some...
This release fixes bug in tensorflow backend caused due to difference in dimension ordering between ...
Changes: Compatibility with scikit-learn >= 0.22 from https://github.com/kundajelab/tfmodisco/pull/...
Added pynnd=True option to use pynn descent for coarse-grained affinity matrix computation (caveat: ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/94 Emphasis is now given to the core ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/82 Default settings for variable-len...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/61. Instead of deriving an embedding ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/83. Results should remain identical
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/63. Should fix some issues where modi...
described in more detail in https://github.com/kundajelab/tfmodisco/pull/91 The API is demonstrated ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/87 I had changed the API a bit so tha...
Corresponds to pull request https://github.com/kundajelab/tfmodisco/pull/46 Updated hit scoring str...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/45; some modifications for cutting do...
Release created at the request of people who were using an older version of TF-MoDISco. The primary ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/86 Package installation was broken b...
The bugfix in https://github.com/kundajelab/tfmodisco/pull/47 broke backward compatibility with some...
This release fixes bug in tensorflow backend caused due to difference in dimension ordering between ...
Changes: Compatibility with scikit-learn >= 0.22 from https://github.com/kundajelab/tfmodisco/pull/...