Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/82 Default settings for variable-length seqlet identification seem not-great, so reverting to the previous default of fixed-length seqlet identification (which has been battle-tested more) Putting in the fix caught by #81 Another minor fix for cases where there are lots of ties in the scores during seqlet identification (which could occur with the variable-length seqlet identification
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/83. Results should remain identical
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/76 Fix for error when slicing coordin...
described in more detail in https://github.com/kundajelab/tfmodisco/pull/91 The API is demonstrated ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/94 Emphasis is now given to the core ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/78 AGKM embeddings are now the defau...
Release created at the request of people who were using an older version of TF-MoDISco. The primary ...
Corresponds to pull request https://github.com/kundajelab/tfmodisco/pull/51 - for situations where t...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/73/files Changes: Seqlet pruning upd...
Changes: Compatibility with scikit-learn >= 0.22 from https://github.com/kundajelab/tfmodisco/pull/...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/70 Description of changes: When I di...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/93; version 0.5.14.0 accidentally rem...
Corresponding to this pull request: https://github.com/kundajelab/tfmodisco/pull/2
PR here: https://github.com/kundajelab/tfmodisco/pull/56, example usage here: https://github.com/kun...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/59. Updated setup.py to include leide...
The threshold I had to check for symmetry of the coarse-grained affinity matrix within numerical pre...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/83. Results should remain identical
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/76 Fix for error when slicing coordin...
described in more detail in https://github.com/kundajelab/tfmodisco/pull/91 The API is demonstrated ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/94 Emphasis is now given to the core ...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/78 AGKM embeddings are now the defau...
Release created at the request of people who were using an older version of TF-MoDISco. The primary ...
Corresponds to pull request https://github.com/kundajelab/tfmodisco/pull/51 - for situations where t...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/73/files Changes: Seqlet pruning upd...
Changes: Compatibility with scikit-learn >= 0.22 from https://github.com/kundajelab/tfmodisco/pull/...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/70 Description of changes: When I di...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/93; version 0.5.14.0 accidentally rem...
Corresponding to this pull request: https://github.com/kundajelab/tfmodisco/pull/2
PR here: https://github.com/kundajelab/tfmodisco/pull/56, example usage here: https://github.com/kun...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/59. Updated setup.py to include leide...
The threshold I had to check for symmetry of the coarse-grained affinity matrix within numerical pre...
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/83. Results should remain identical
Corresponds to PR https://github.com/kundajelab/tfmodisco/pull/76 Fix for error when slicing coordin...
described in more detail in https://github.com/kundajelab/tfmodisco/pull/91 The API is demonstrated ...