v0.2.7 (dev) restore multiple threads per annotation file after fix in biogo/hts (#64) add setid builtin to set the ID field and remove need for lua and fix some bugs. fix bug in self with multiple alternates when there were multiple overlaps (thanks Matthew). fix for #68, #69 -- with Number=A, op="self", the output will always have a number of elements equal to the number of alternates. If there are > 1 annos for a given site, later values will overwrite previous
Motivation: Trimeric autotransporter adhesins (TAAs), such as Yersinia YadA, Neisseria NadA, Moraxel...
What's Changed Fix parantheses issue with more than 2 params by @hrshdhgd in https://github.com/map...
RNASeq: Fail more gracefully if SummarizedExperiment object cannot be created. Fixes to handle DRAGE...
v0.2.7 restore multiple threads per annotation file after fix in biogo/hts (#64) new op setid built...
v0.2.7 (dev) restore multiple threads per annotation file after fix in biogo/hts (#64) new op setid...
restore multiple threads per annotation file after fix in biogo/hts (#64) add setid builtin to set t...
This support brings full and proper support for multiallelics. Any annotation file and field that ha...
v0.1.1 set number=1 when op=min see #40 fix when we get -0 converted to just '-' (#42) when an anno...
v0.2.4 30-40% speed improvement when annotating with few, large files by parallelizing decompressio...
this release has minor fixes to by_alt and other bugs: 8c692e2 - handle by_alt + float correctly (#...
Fix the error of checking overlap TSSs for multiple accession numbers. Fix the error of parameter ty...
v0.2.1 correct order of error-checking on return from postannotation (affects users using ID annota...
v0.3.0 support for NON_REF to match any ALT allele (#92) more work on multiple alts (#87) there sh...
v0.1.1 set number=1 when op=min see #40 fix when we get -0 converted to just '-' (#42) when an anno...
At MBARI, we were experiencing slow loads of annotations when a video had thousands of annotations. ...
Motivation: Trimeric autotransporter adhesins (TAAs), such as Yersinia YadA, Neisseria NadA, Moraxel...
What's Changed Fix parantheses issue with more than 2 params by @hrshdhgd in https://github.com/map...
RNASeq: Fail more gracefully if SummarizedExperiment object cannot be created. Fixes to handle DRAGE...
v0.2.7 restore multiple threads per annotation file after fix in biogo/hts (#64) new op setid built...
v0.2.7 (dev) restore multiple threads per annotation file after fix in biogo/hts (#64) new op setid...
restore multiple threads per annotation file after fix in biogo/hts (#64) add setid builtin to set t...
This support brings full and proper support for multiallelics. Any annotation file and field that ha...
v0.1.1 set number=1 when op=min see #40 fix when we get -0 converted to just '-' (#42) when an anno...
v0.2.4 30-40% speed improvement when annotating with few, large files by parallelizing decompressio...
this release has minor fixes to by_alt and other bugs: 8c692e2 - handle by_alt + float correctly (#...
Fix the error of checking overlap TSSs for multiple accession numbers. Fix the error of parameter ty...
v0.2.1 correct order of error-checking on return from postannotation (affects users using ID annota...
v0.3.0 support for NON_REF to match any ALT allele (#92) more work on multiple alts (#87) there sh...
v0.1.1 set number=1 when op=min see #40 fix when we get -0 converted to just '-' (#42) when an anno...
At MBARI, we were experiencing slow loads of annotations when a video had thousands of annotations. ...
Motivation: Trimeric autotransporter adhesins (TAAs), such as Yersinia YadA, Neisseria NadA, Moraxel...
What's Changed Fix parantheses issue with more than 2 params by @hrshdhgd in https://github.com/map...
RNASeq: Fail more gracefully if SummarizedExperiment object cannot be created. Fixes to handle DRAGE...