Publication date
October 2016
DOIAbstract
v.0.4.2 gtypes object from [strataG] (https://github.com/EricArcher/strataG) package can now be read/write in/out of Stackr using the tidy_genomic_data and genomic_converter functions
v.0.4.2 gtypes object from [strataG] (https://github.com/EricArcher/strataG) package can now be read/write in/out of Stackr using the tidy_genomic_data and genomic_converter functions
Full Changelog: https://github.com/Roy-lab/clade-specific_gene_sets/compare/v1.0.0...v1.1.
v.0.2.8 bug fix in tidy_genomic_data while using data.table::melt.data.table instead of tidyr::ga...
What's Changed refactor: update to lastest version of gene-normalizer by @korikuzma in https://gith...
v.0.4.3 bug fix in summary_haplotypes stemming from a new readr version artifacts replace paralogs ...
v.0.2.9 bug fix in tidy_genomic_data bug fix between stackr -> devtools -> github -> travis, this...
v.0.2.7 Added a NEWS.md file to track changes to the package. New function: individuals2strata. Se...
v.0.2.7 Added a NEWS.md file to track changes to the package. New function: individuals2strata. Se...
v.0.4.6 I'm pleased to announce that stackr parallel mode now works with Windows! Nothing to instal...
v.0.3.6 fixed a bug in vcf_imputation, the function now calls genomic_converter with all the bell...
v.0.3.4 updated documentation bug fix in summary_haplotypes introduced by the new version of dplyr...
v.0.2.8 While changing some lines with tidyr::spread and tidyr::gather for data.table::dcast.data....
Introducing haplo2gsi_sim function. Conversion of STACKS haplotypes file into a gsi_sim data input f...
What's Changed updates in ArchR2Signac functions to read fragments file not only from 10X Genomics,...
genomic_converter, tidy_genomic_data: bug fix when individuals are integers fis_summary: arguments u...
What's Changed fix: move SOURCE_CLASS to cli (main branch) by @korikuzma in https://github.com/canc...
Full Changelog: https://github.com/Roy-lab/clade-specific_gene_sets/compare/v1.0.0...v1.1.
v.0.2.8 bug fix in tidy_genomic_data while using data.table::melt.data.table instead of tidyr::ga...
What's Changed refactor: update to lastest version of gene-normalizer by @korikuzma in https://gith...
v.0.4.3 bug fix in summary_haplotypes stemming from a new readr version artifacts replace paralogs ...
v.0.2.9 bug fix in tidy_genomic_data bug fix between stackr -> devtools -> github -> travis, this...
v.0.2.7 Added a NEWS.md file to track changes to the package. New function: individuals2strata. Se...
v.0.2.7 Added a NEWS.md file to track changes to the package. New function: individuals2strata. Se...
v.0.4.6 I'm pleased to announce that stackr parallel mode now works with Windows! Nothing to instal...
v.0.3.6 fixed a bug in vcf_imputation, the function now calls genomic_converter with all the bell...
v.0.3.4 updated documentation bug fix in summary_haplotypes introduced by the new version of dplyr...
v.0.2.8 While changing some lines with tidyr::spread and tidyr::gather for data.table::dcast.data....
Introducing haplo2gsi_sim function. Conversion of STACKS haplotypes file into a gsi_sim data input f...
What's Changed updates in ArchR2Signac functions to read fragments file not only from 10X Genomics,...
genomic_converter, tidy_genomic_data: bug fix when individuals are integers fis_summary: arguments u...
What's Changed fix: move SOURCE_CLASS to cli (main branch) by @korikuzma in https://github.com/canc...
Full Changelog: https://github.com/Roy-lab/clade-specific_gene_sets/compare/v1.0.0...v1.1.
v.0.2.8 bug fix in tidy_genomic_data while using data.table::melt.data.table instead of tidyr::ga...
What's Changed refactor: update to lastest version of gene-normalizer by @korikuzma in https://gith...
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