Supplementary file 1: BLASTN results for protospacers search This file contains the output of the BLASTN search of the spacers in the same genomic partition. See materials and methods for more details regarding the BLASTN search. All sequences between two adjacent repeats (less than 60bp apart) were retrieved and marked with the first repeat coordinates, spacer coordinates, and “Array” flag. For all single repeat-like sequences, 30bp up/downstream as potential spacers and marked with the repeat coordinates, spacer coordinates, and “SingleUpstream” or “SingleDownstream” flags
The adaptation against foreign nucleic acids by the CRISPR–Cas system (Clustered Regularly In-terspa...
SpacePHARER (CRISPR Spacer Phage–Host Pair Finder) is a sensitive and fast tool for de novo predicti...
<p>The FastTree output is shown with local bootstrap support on respective nodes. CRISPR2 array type...
This data file consists of a FASTA file containing all spacers in the CRISPR spacer database used fo...
Output from BLASTN searches of complete NCBI Pseudomonas plasmids >200 kbp against sequences of thre...
International audienceIn Archaea and Bacteria, the arrays called CRISPRs for 'clustered regularly in...
Background: CRISPR (clustered regularly interspaced short palindromic repeats) RNAs provide the spec...
Applying blastn to obtain the taxonomic information of each direct shotgun sequencing read that cont...
CRISPRs spacers were queried using blastn against the 184 pleolipovirus genomes from this study to a...
<p>The CRISPR1 arrays from 42 <i>H</i>. <i>cinaedi</i> strains are represented graphically. The repe...
Molecular biologists, geneticists, and other life scientists use the BLAST homology search package a...
S1 Data Dataset including the discovered CRISPR spacers, direct repeats, protospacers, co-occurrenc...
Bacteria and archaea are in a constant arms race against viruses and mobile genetic elements (MGEs)....
<p><b>Copyright information:</b></p><p>Taken from "The CRISPRdb database and tools to display CRISPR...
Protospacer adjacent motifs (PAMs) were originally characterized for CRISPR-Cas systems that were cl...
The adaptation against foreign nucleic acids by the CRISPR–Cas system (Clustered Regularly In-terspa...
SpacePHARER (CRISPR Spacer Phage–Host Pair Finder) is a sensitive and fast tool for de novo predicti...
<p>The FastTree output is shown with local bootstrap support on respective nodes. CRISPR2 array type...
This data file consists of a FASTA file containing all spacers in the CRISPR spacer database used fo...
Output from BLASTN searches of complete NCBI Pseudomonas plasmids >200 kbp against sequences of thre...
International audienceIn Archaea and Bacteria, the arrays called CRISPRs for 'clustered regularly in...
Background: CRISPR (clustered regularly interspaced short palindromic repeats) RNAs provide the spec...
Applying blastn to obtain the taxonomic information of each direct shotgun sequencing read that cont...
CRISPRs spacers were queried using blastn against the 184 pleolipovirus genomes from this study to a...
<p>The CRISPR1 arrays from 42 <i>H</i>. <i>cinaedi</i> strains are represented graphically. The repe...
Molecular biologists, geneticists, and other life scientists use the BLAST homology search package a...
S1 Data Dataset including the discovered CRISPR spacers, direct repeats, protospacers, co-occurrenc...
Bacteria and archaea are in a constant arms race against viruses and mobile genetic elements (MGEs)....
<p><b>Copyright information:</b></p><p>Taken from "The CRISPRdb database and tools to display CRISPR...
Protospacer adjacent motifs (PAMs) were originally characterized for CRISPR-Cas systems that were cl...
The adaptation against foreign nucleic acids by the CRISPR–Cas system (Clustered Regularly In-terspa...
SpacePHARER (CRISPR Spacer Phage–Host Pair Finder) is a sensitive and fast tool for de novo predicti...
<p>The FastTree output is shown with local bootstrap support on respective nodes. CRISPR2 array type...