Publication date
May 2022
DOIAbstract
Changes taxonkit create-taxdump: accepts arbitrary ranks #60 better handle of taxa with same names. many flags changed
Changes taxonkit create-taxdump: accepts arbitrary ranks #60 better handle of taxa with same names. many flags changed
Please see https://github.com/taxprofiler/taxpasta/blob/0.4.0/CHANGELOG.md for the full release note...
Fixes for API changes in ggplot2 v3.4.0 and tidyselect v1.2.0 (#42, #44, @kelly-sovacool). pool_taxo...
:seedling: :arrow_right: :deciduous_tree: Add new taxa or taxonomic groups to the NCBI Taxdump file
Changes TaxonKit v0.12.0 taxonkit create-taxdump: accepts arbitrary ranks #60 better handle of ta...
Changes TaxonKit v0.13.0 taxonkit reformat: add a new placeholder {K} for rank kingdom. #64 do not...
Changes TaxonKit v0.11.1 taxonkit create-taxdump: fix bug of missing Class rank, contributed by @a...
TaxonKit v0.11.0 new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom ta...
Changes TaxonKit v0.14.0 taxonkit create-taxdump: save taxIds in int32 instead of uint32, as BLAST...
Changes TaxonKit v0.14.1 taxonkit reformat: The flag -S/--pseudo-strain does not require -F/--fill...
Changes TaxonKit v0.10.1 taxonkit cami2-filter: fix option --show-rank which did not work in v0.10...
Changes TaxonKit v0.14.2 taxonkit filter: fix checking merged/deleted/not-found taxids. #80 taxo...
Changes TaxonKit v0.10.0 Please cite Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI ...
Changes new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom taxonomy, e...
See Wiki page for description of the software. What changed in version 3.1.7... New feature Modify E...
Improvements to parse_tax() (#32, @kelly-sovacool) New column label_html provides HTML to correctly ...
Please see https://github.com/taxprofiler/taxpasta/blob/0.4.0/CHANGELOG.md for the full release note...
Fixes for API changes in ggplot2 v3.4.0 and tidyselect v1.2.0 (#42, #44, @kelly-sovacool). pool_taxo...
:seedling: :arrow_right: :deciduous_tree: Add new taxa or taxonomic groups to the NCBI Taxdump file
Changes TaxonKit v0.12.0 taxonkit create-taxdump: accepts arbitrary ranks #60 better handle of ta...
Changes TaxonKit v0.13.0 taxonkit reformat: add a new placeholder {K} for rank kingdom. #64 do not...
Changes TaxonKit v0.11.1 taxonkit create-taxdump: fix bug of missing Class rank, contributed by @a...
TaxonKit v0.11.0 new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom ta...
Changes TaxonKit v0.14.0 taxonkit create-taxdump: save taxIds in int32 instead of uint32, as BLAST...
Changes TaxonKit v0.14.1 taxonkit reformat: The flag -S/--pseudo-strain does not require -F/--fill...
Changes TaxonKit v0.10.1 taxonkit cami2-filter: fix option --show-rank which did not work in v0.10...
Changes TaxonKit v0.14.2 taxonkit filter: fix checking merged/deleted/not-found taxids. #80 taxo...
Changes TaxonKit v0.10.0 Please cite Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI ...
Changes new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom taxonomy, e...
See Wiki page for description of the software. What changed in version 3.1.7... New feature Modify E...
Improvements to parse_tax() (#32, @kelly-sovacool) New column label_html provides HTML to correctly ...
Please see https://github.com/taxprofiler/taxpasta/blob/0.4.0/CHANGELOG.md for the full release note...
Fixes for API changes in ggplot2 v3.4.0 and tidyselect v1.2.0 (#42, #44, @kelly-sovacool). pool_taxo...
:seedling: :arrow_right: :deciduous_tree: Add new taxa or taxonomic groups to the NCBI Taxdump file
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