Changes TaxonKit v0.12.0 taxonkit create-taxdump: accepts arbitrary ranks #60 better handle of taxa with same names. many flags changed. Please cite Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI Taxonomy toolkit, Journal of Genetics and Genomics, https://doi.org/10.1016/j.jgg.2021.03.006 Links Tips run taxonkit version to check update !!! run taxonkit genautocomplete to update Bash completion !!! OS Arch File, 中国镜像 Download Count Linux 64-bit taxonkit_linux_amd64.tar.gz, 中国镜像 Linux arm64 taxonkit_linux_arm64.tar.gz, 中国镜像 macOS 64-bit taxonkit_darwin_amd64.tar.gz, 中国镜像 macOS arm64 taxonkit_darwin_arm64.tar.gz, 中国镜像 Windows 64-bit taxonkit_windows_amd64.exe.tar.gz, 中国镜
Changes SeqKit v2.5.1 - 2023-08-09 seqkit stats: fix a concurrency bug (file name error) introduce...
CHANGELOG [v0.13.2] - 2022-05-02 Mon Add: update gnmatcher to v0.9.6, introduce species_group optio...
Changelog SeqKit v0.10.2 seqkit: fix bug of parsing sequence ID delimited by tab (\t). #78 seqkit ...
Changes TaxonKit v0.10.0 Please cite Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI ...
Changes TaxonKit v0.11.1 taxonkit create-taxdump: fix bug of missing Class rank, contributed by @a...
Changes TaxonKit v0.10.1 taxonkit cami2-filter: fix option --show-rank which did not work in v0.10...
Changes TaxonKit v0.14.0 taxonkit create-taxdump: save taxIds in int32 instead of uint32, as BLAST...
Changes TaxonKit v0.13.0 taxonkit reformat: add a new placeholder {K} for rank kingdom. #64 do not...
Changes TaxonKit v0.14.1 taxonkit reformat: The flag -S/--pseudo-strain does not require -F/--fill...
Changes TaxonKit v0.14.2 taxonkit filter: fix checking merged/deleted/not-found taxids. #80 taxo...
Changes taxonkit create-taxdump: accepts arbitrary ranks #60 better handle of taxa with same names...
Changes TaxonKit v0.15.0 taxonkit reformat: For lineages with more than one node, if it fails to ...
TaxonKit v0.11.0 new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom ta...
Changes new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom taxonomy, e...
Commits fb6a4e4: Include taxonomy in identifiers and attributes indices (Richard Challis) #100 692c...
Changes SeqKit v2.5.1 - 2023-08-09 seqkit stats: fix a concurrency bug (file name error) introduce...
CHANGELOG [v0.13.2] - 2022-05-02 Mon Add: update gnmatcher to v0.9.6, introduce species_group optio...
Changelog SeqKit v0.10.2 seqkit: fix bug of parsing sequence ID delimited by tab (\t). #78 seqkit ...
Changes TaxonKit v0.10.0 Please cite Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI ...
Changes TaxonKit v0.11.1 taxonkit create-taxdump: fix bug of missing Class rank, contributed by @a...
Changes TaxonKit v0.10.1 taxonkit cami2-filter: fix option --show-rank which did not work in v0.10...
Changes TaxonKit v0.14.0 taxonkit create-taxdump: save taxIds in int32 instead of uint32, as BLAST...
Changes TaxonKit v0.13.0 taxonkit reformat: add a new placeholder {K} for rank kingdom. #64 do not...
Changes TaxonKit v0.14.1 taxonkit reformat: The flag -S/--pseudo-strain does not require -F/--fill...
Changes TaxonKit v0.14.2 taxonkit filter: fix checking merged/deleted/not-found taxids. #80 taxo...
Changes taxonkit create-taxdump: accepts arbitrary ranks #60 better handle of taxa with same names...
Changes TaxonKit v0.15.0 taxonkit reformat: For lineages with more than one node, if it fails to ...
TaxonKit v0.11.0 new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom ta...
Changes new command taxonkit create-taxdump: Create NCBI-style taxdump files for custom taxonomy, e...
Commits fb6a4e4: Include taxonomy in identifiers and attributes indices (Richard Challis) #100 692c...
Changes SeqKit v2.5.1 - 2023-08-09 seqkit stats: fix a concurrency bug (file name error) introduce...
CHANGELOG [v0.13.2] - 2022-05-02 Mon Add: update gnmatcher to v0.9.6, introduce species_group optio...
Changelog SeqKit v0.10.2 seqkit: fix bug of parsing sequence ID delimited by tab (\t). #78 seqkit ...