Allow parallelization via setting the number of threads. BCF output is now unsorted, and must be sorted afterwards with bcftools. Imprecise variants are skipped for now, until proper support is implemented
Features better homopolymer error detection (#226) (b95d03d) eliminate false positives and false ne...
Bug Fixes fixed bug causing NaN likelihoods when dealing with samples that do not contain any homop...
Bug Fixes temporarily disable performance optimization in realignment because it can lead to undere...
Allow definition of re-usable expressions in scenarions (via a new key "expressions:", see https://v...
Allow definition of re-usable expressions in scenarions (via a new key "expressions:", see https://v...
Allow to set reference buffer size (--reference-buffer-size), for improved parallelization when call...
Features improved formula simplification for negations which can provide major speedups and fixes a...
Bug Fixes fix bug in homopolymer error detection that has led to wrong homopolymer error calls. Thi...
Add support for inversions, deletions and breakends. Slightly modified CLI options
Improvements to SNV and MNV calling: in case of reads with indels, perform a realignment to properly...
Performance Improvements various speed improvements for scenario evaluations (#212) (f865e1b
Features refinement of homopolymer error model (for increased specificity) (#246) (380245d) Bug Fi...
Features adaptive integration (speeding up the evaluation of complex scenarios) (#199) (8043f94) B...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
Fixed a bug in the new prior implementation that led to almost infinite filling of a result cache, l...
Features better homopolymer error detection (#226) (b95d03d) eliminate false positives and false ne...
Bug Fixes fixed bug causing NaN likelihoods when dealing with samples that do not contain any homop...
Bug Fixes temporarily disable performance optimization in realignment because it can lead to undere...
Allow definition of re-usable expressions in scenarions (via a new key "expressions:", see https://v...
Allow definition of re-usable expressions in scenarions (via a new key "expressions:", see https://v...
Allow to set reference buffer size (--reference-buffer-size), for improved parallelization when call...
Features improved formula simplification for negations which can provide major speedups and fixes a...
Bug Fixes fix bug in homopolymer error detection that has led to wrong homopolymer error calls. Thi...
Add support for inversions, deletions and breakends. Slightly modified CLI options
Improvements to SNV and MNV calling: in case of reads with indels, perform a realignment to properly...
Performance Improvements various speed improvements for scenario evaluations (#212) (f865e1b
Features refinement of homopolymer error model (for increased specificity) (#246) (380245d) Bug Fi...
Features adaptive integration (speeding up the evaluation of complex scenarios) (#199) (8043f94) B...
Features added ability to omit MAPQ adjustment for known variants (varlociraptor preprocess variant...
Fixed a bug in the new prior implementation that led to almost infinite filling of a result cache, l...
Features better homopolymer error detection (#226) (b95d03d) eliminate false positives and false ne...
Bug Fixes fixed bug causing NaN likelihoods when dealing with samples that do not contain any homop...
Bug Fixes temporarily disable performance optimization in realignment because it can lead to undere...
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