This paper presents a computational frequency-domain boundary value analysis of acoustic metamaterials and phononic crystals based on a general homogenization framework, which features a novel definition of the macro-scale fields based on the Floquet-Bloch average in combination with a family of characteristic projection functions leading to a generalized macro-scale continuum. Restricting to 1D elastodynamics and the frequency-domain response for the sake of compactness, the boundary value problem on the generalized macro-scale continuum is elaborated. Several challenges are identified, in particular the non-uniqueness in selection of the boundary conditions for the homogenized continuum and the presence of spurious short wave solutions. T...