Publication date
September 2020
DOIAbstract
added bit-filter-KOFamScan-results program added bit-GL-combine-KO-and-tax-table
added bit-filter-KOFamScan-results program added bit-GL-combine-KO-and-tax-table
<p>modification to COV-IRT programs bit-cov-combine-go-summaries-with-domains and bit-cov-summ...
fixed python version problem in bit-filter-seqs-by-length added version script bit-versio
adding script to pull genome-assembly summarization workflow, bit-get-genome-summarize-w
added bit-filter-KOFamScan-results program added bit-GL-combine-KO-and-tax-table
<ul> <li>robustness improvements to <code>bit-GL-combine-KO-and-tax-tables</cod...
<ul> <li>added <code>bit-GL-combine-contig-tax-tables</code></li> <...
modifying bit-GL-combine-contig-tax-tables to output an un-normalized combined table also, and to ha...
updating bit-GL-combine-KO-and-tax-tables to be able to do DESeq2's median-ratio normalization too, ...
updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports to
improved bit-summarize-assembly, adding -v and --version flags to all python scripts (can still get ...
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports to
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
adding transpose option to bit-summarize-assembly output table and handling full paths bette
<p>adding <code>bit-kraken2-to-taxon-summaries</code> and <code>bit-combine-...
<p>modification to COV-IRT programs bit-cov-combine-go-summaries-with-domains and bit-cov-summ...
fixed python version problem in bit-filter-seqs-by-length added version script bit-versio
adding script to pull genome-assembly summarization workflow, bit-get-genome-summarize-w
added bit-filter-KOFamScan-results program added bit-GL-combine-KO-and-tax-table
<ul> <li>robustness improvements to <code>bit-GL-combine-KO-and-tax-tables</cod...
<ul> <li>added <code>bit-GL-combine-contig-tax-tables</code></li> <...
modifying bit-GL-combine-contig-tax-tables to output an un-normalized combined table also, and to ha...
updating bit-GL-combine-KO-and-tax-tables to be able to do DESeq2's median-ratio normalization too, ...
updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports to
improved bit-summarize-assembly, adding -v and --version flags to all python scripts (can still get ...
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports to
adding new DBs and programs for working with GO! bit-get-go-term-info bit-slim-down-go-terms bit-s...
adding transpose option to bit-summarize-assembly output table and handling full paths bette
<p>adding <code>bit-kraken2-to-taxon-summaries</code> and <code>bit-combine-...
<p>modification to COV-IRT programs bit-cov-combine-go-summaries-with-domains and bit-cov-summ...
fixed python version problem in bit-filter-seqs-by-length added version script bit-versio
adding script to pull genome-assembly summarization workflow, bit-get-genome-summarize-w
Add to ORKG