Publication date
February 2021
DOIAbstract
modifying bit-GL-combine-contig-tax-tables to output an un-normalized combined table also, and to have option for CPM or MR normalization metho
modifying bit-GL-combine-contig-tax-tables to output an un-normalized combined table also, and to have option for CPM or MR normalization metho
updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports to
added bit-calc-msa-shannon to compute variation among columns of multiple sequence alignment updated...
<ul> <li>updated help/info for <code>bit-calc-variation-in-msa</code></li...
modifying bit-GL-combine-contig-tax-tables to output an un-normalized combined table also, and to ha...
updating bit-GL-combine-KO-and-tax-tables to be able to do DESeq2's median-ratio normalization too, ...
robustness improvements to bit-GL-combine-KO-and-tax-tables and bit-GL-combine-contig-tax-tables tha...
added bit-filter-KOFamScan-results program added bit-GL-combine-KO-and-tax-table
<ul> <li>added <code>bit-GL-combine-contig-tax-tables</code></li> <...
<ul> <li>robustness improvements to <code>bit-normalize-table</code></li&...
<ul> <li>robustness improvements to <code>bit-normalize-table</code></li&...
<ul> <li>robustness improvements to <code>bit-normalize-table</code></li&...
adding transpose option to bit-summarize-assembly output table and handling full paths bette
modification to COV-IRT programs bit-cov-combine-go-summaries-with-domains and bit-cov-summarize-go-...
<p>updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports too</...
<ul> <li>adding <code>bit-median-ratio-norm</code></li> </ul>
updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports to
added bit-calc-msa-shannon to compute variation among columns of multiple sequence alignment updated...
<ul> <li>updated help/info for <code>bit-calc-variation-in-msa</code></li...
modifying bit-GL-combine-contig-tax-tables to output an un-normalized combined table also, and to ha...
updating bit-GL-combine-KO-and-tax-tables to be able to do DESeq2's median-ratio normalization too, ...
robustness improvements to bit-GL-combine-KO-and-tax-tables and bit-GL-combine-contig-tax-tables tha...
added bit-filter-KOFamScan-results program added bit-GL-combine-KO-and-tax-table
<ul> <li>added <code>bit-GL-combine-contig-tax-tables</code></li> <...
<ul> <li>robustness improvements to <code>bit-normalize-table</code></li&...
<ul> <li>robustness improvements to <code>bit-normalize-table</code></li&...
<ul> <li>robustness improvements to <code>bit-normalize-table</code></li&...
adding transpose option to bit-summarize-assembly output table and handling full paths bette
modification to COV-IRT programs bit-cov-combine-go-summaries-with-domains and bit-cov-summarize-go-...
<p>updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports too</...
<ul> <li>adding <code>bit-median-ratio-norm</code></li> </ul>
updating bit-dl-ncbi-assemblies to be able to pull feature tab, stats, and reports to
added bit-calc-msa-shannon to compute variation among columns of multiple sequence alignment updated...
<ul> <li>updated help/info for <code>bit-calc-variation-in-msa</code></li...
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