Publication date
August 2023
DOIAbstract
SyRI output files for all pairs of genome alignments for E. melliodora Hi-C analysis. Each file contains the syntenc and rearranged sequences between each pair of genomes.</p
SyRI output files for all pairs of genome alignments for E. melliodora Hi-C analysis. Each file contains the syntenc and rearranged sequences between each pair of genomes.</p
This is the sequence alignment file used in phylogenetic analyses for our study. The gene alignment...
This is a zipped (.zip) folder that contains the alignments used for molecular phylogenetic analyses...
A multiple genome alignment of 44 strains of Xanthomonas citri output from the Mugsy genome alignmen...
SyRI output files for all pairs of genome alignments for E. melliodora Hi-C analysis. Each file cont...
tsv file describing all syntenic, rearranged, and not-aligned regions bewteen E. milliodora (referen...
Translated homologous gene alignments from transcriptome data. There are two datasets with the parti...
Gene tree alignment partition files for phylogenomic data. Partitions represent codon positions
Manually trimmed alignment of all ABC transporter sequences used in the phylogenetic analysis.</p
This file contains: (1) unaligned sequences, (2) trimmed gene alignments, (3) supermatrix alignments...
The zip file contains the alignment files of COI and TPI genes, which were used to reconstruct phylo...
This is a multiple sequence alignment file (in PHYLIP format) obtained by concatenating the sequence...
Genomic differences can range from single nucleotide differences (SNPs) to large complex structural ...
This is the nexus alignment file used for phylogenetic analyses. The character set for each of the t...
Interleaved alignment of all genes in Nexus format, with exclusion settings and partition scheme (P5...
This folder contains coding sequence alignments and single copy ortholog alignments used to conduct ...
This is the sequence alignment file used in phylogenetic analyses for our study. The gene alignment...
This is a zipped (.zip) folder that contains the alignments used for molecular phylogenetic analyses...
A multiple genome alignment of 44 strains of Xanthomonas citri output from the Mugsy genome alignmen...
SyRI output files for all pairs of genome alignments for E. melliodora Hi-C analysis. Each file cont...
tsv file describing all syntenic, rearranged, and not-aligned regions bewteen E. milliodora (referen...
Translated homologous gene alignments from transcriptome data. There are two datasets with the parti...
Gene tree alignment partition files for phylogenomic data. Partitions represent codon positions
Manually trimmed alignment of all ABC transporter sequences used in the phylogenetic analysis.</p
This file contains: (1) unaligned sequences, (2) trimmed gene alignments, (3) supermatrix alignments...
The zip file contains the alignment files of COI and TPI genes, which were used to reconstruct phylo...
This is a multiple sequence alignment file (in PHYLIP format) obtained by concatenating the sequence...
Genomic differences can range from single nucleotide differences (SNPs) to large complex structural ...
This is the nexus alignment file used for phylogenetic analyses. The character set for each of the t...
Interleaved alignment of all genes in Nexus format, with exclusion settings and partition scheme (P5...
This folder contains coding sequence alignments and single copy ortholog alignments used to conduct ...
This is the sequence alignment file used in phylogenetic analyses for our study. The gene alignment...
This is a zipped (.zip) folder that contains the alignments used for molecular phylogenetic analyses...
A multiple genome alignment of 44 strains of Xanthomonas citri output from the Mugsy genome alignmen...
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