We report here the results for an ab initio approach to obtain the parameters needed for molecular simulations using a polarizable force field. These parameters consist of the atomic charges, polarizabilities, and radii. The former two are readily obtained using methods reported previously (van Duijnen and Swart, J Phys Chem A 1998, 102, 2399; Swart et al. J Comput Chem 2001, 22, 79), whereas here we report a new approach for obtaining atomic second-order radii (SOR), which is based on second-order atomic moments in scaled Voronoi cells. These parameters are obtained from quantum-chemistry calculations on the monomers, and used without further adaptation directly for intermolecular interactions. The approach works very well as shown here fo...
A new classical empirical potential is proposed for water. The model uses a polarizable atomic multi...
<div>Computer simulations of bio-molecular systems often use force fields, which are combinations of...
In this work, we report two polarizable molecular mechanics (polMM) force field models for estimatin...
We report here the results for an ab initio approach to obtain the parameters needed for molecular s...
We report here the results for an ab initio approach to obtain the parameters needed for molecular s...
In this work we propose a strategy based on quantum mechanical (QM) calculations to parametrize a po...
A detailed calculation of protein interactions with explicitly considered water molecules takes enor...
Classical molecular dynamics (MD) simulations based on atomistic models are increasingly used to stu...
In order to carry out a detailed analysis of the molecular static polarizability, which is the respo...
Molecular-mechanical (MM) force fields are mathematical functions that map the geometry of a molecul...
ABSTRACT: In order to carry out a detailed analysis of the molecular static polarizability, which is...
We calculate the polarization portion of electrostatic interactions at the atomic scale using quantu...
Driven by the constant increase in computational resources and power, modeling of biomolecular syste...
Understanding of intermolecular interactions are important in order to gain insight into a large num...
We present an ab initio parametrization scheme for explicitly dipole-polarizable force fields for th...
A new classical empirical potential is proposed for water. The model uses a polarizable atomic multi...
<div>Computer simulations of bio-molecular systems often use force fields, which are combinations of...
In this work, we report two polarizable molecular mechanics (polMM) force field models for estimatin...
We report here the results for an ab initio approach to obtain the parameters needed for molecular s...
We report here the results for an ab initio approach to obtain the parameters needed for molecular s...
In this work we propose a strategy based on quantum mechanical (QM) calculations to parametrize a po...
A detailed calculation of protein interactions with explicitly considered water molecules takes enor...
Classical molecular dynamics (MD) simulations based on atomistic models are increasingly used to stu...
In order to carry out a detailed analysis of the molecular static polarizability, which is the respo...
Molecular-mechanical (MM) force fields are mathematical functions that map the geometry of a molecul...
ABSTRACT: In order to carry out a detailed analysis of the molecular static polarizability, which is...
We calculate the polarization portion of electrostatic interactions at the atomic scale using quantu...
Driven by the constant increase in computational resources and power, modeling of biomolecular syste...
Understanding of intermolecular interactions are important in order to gain insight into a large num...
We present an ab initio parametrization scheme for explicitly dipole-polarizable force fields for th...
A new classical empirical potential is proposed for water. The model uses a polarizable atomic multi...
<div>Computer simulations of bio-molecular systems often use force fields, which are combinations of...
In this work, we report two polarizable molecular mechanics (polMM) force field models for estimatin...