We report here the results for an ab initio approach to obtain the parameters needed for molecular simulations using a polarizable force field. These parameters consist of the atomic charges, polarizabilities, and radii. The former two are readily obtained using methods reported previously (van Duijnen and Swart, J Phys Chem A 1998, 102, 2399; Swart et al. J Comput Chem 2001, 22, 79), whereas here we report a new approach for obtaining atomic second-order radii (SOR), which is based on second-order atomic moments in scaled Voronoi cells. These parameters are obtained from quantum-chemistry calculations on the monomers, and used without further adaptation directly for intermolecular interactions. The approach works very well as shown here fo...
Polarizabilities and London dispersion forces are important to many chemical processes. Leading term...
A new classical empirical potential is proposed for water. The model uses a polarizable atomic multi...
Modeling structural and thermodynamic properties of nucleic acids has long been a challenge in the d...
We report here the results for an ab initio approach to obtain the parameters needed for molecular s...
In this work we propose a strategy based on quantum mechanical (QM) calculations to parametrize a po...
A detailed calculation of protein interactions with explicitly considered water molecules takes enor...
Molecular-mechanical (MM) force fields are mathematical functions that map the geometry of a molecul...
Classical molecular dynamics (MD) simulations based on atomistic models are increasingly used to stu...
Driven by the constant increase in computational resources and power, modeling of biomolecular syste...
We present an ab initio parametrization scheme for explicitly dipole-polarizable force fields for th...
In order to carry out a detailed analysis of the molecular static polarizability, which is the respo...
ABSTRACT: In order to carry out a detailed analysis of the molecular static polarizability, which is...
We calculate the polarization portion of electrostatic interactions at the atomic scale using quantu...
Understanding of intermolecular interactions are important in order to gain insight into a large num...
Most of the energy potential functional used in biological systems only treat electronic polarizatio...
Polarizabilities and London dispersion forces are important to many chemical processes. Leading term...
A new classical empirical potential is proposed for water. The model uses a polarizable atomic multi...
Modeling structural and thermodynamic properties of nucleic acids has long been a challenge in the d...
We report here the results for an ab initio approach to obtain the parameters needed for molecular s...
In this work we propose a strategy based on quantum mechanical (QM) calculations to parametrize a po...
A detailed calculation of protein interactions with explicitly considered water molecules takes enor...
Molecular-mechanical (MM) force fields are mathematical functions that map the geometry of a molecul...
Classical molecular dynamics (MD) simulations based on atomistic models are increasingly used to stu...
Driven by the constant increase in computational resources and power, modeling of biomolecular syste...
We present an ab initio parametrization scheme for explicitly dipole-polarizable force fields for th...
In order to carry out a detailed analysis of the molecular static polarizability, which is the respo...
ABSTRACT: In order to carry out a detailed analysis of the molecular static polarizability, which is...
We calculate the polarization portion of electrostatic interactions at the atomic scale using quantu...
Understanding of intermolecular interactions are important in order to gain insight into a large num...
Most of the energy potential functional used in biological systems only treat electronic polarizatio...
Polarizabilities and London dispersion forces are important to many chemical processes. Leading term...
A new classical empirical potential is proposed for water. The model uses a polarizable atomic multi...
Modeling structural and thermodynamic properties of nucleic acids has long been a challenge in the d...