Root mean square deviation (RMSD) plots for (a) Mpro-CHEMBL1940602 (b) Mpro-CHEMBL2036486 (c) Mpro-CHEMBL3628485 (d) Mpro-CHEMBL200972 (e) Mpro-CHEMBL2036488, and (fCH) Mpro-X77 (control), calculated over the period of 100 ns MD simulation.</p
<p>A. Plot of root mean square deviation (RMSD) of model 1L P<sub>core</sub> Cα atoms versus simulat...
<p>Over a 10 ns span the RMSD remains very low, below 0.75 Å for trace alpha carbons of the PECr com...
MD Simulation RMSD Plot of C-alpha atoms in proteins and ligands (A) Hesperetin (B) Curcumin (C) Iso...
<p>RMSD for (a) CCR2 and (b) CCR5 Cα from the initial structures throughout the simulation of 5 ns a...
<p>Root mean square deviations (RMSDs) of the alpha-carbon positions during 10,000-ps simulations.</...
<p>The root mean square of deviation (RMSD) (average of all ten parallel simulations in the same con...
<p>Root mean square deviations (RMSDs) of the alpha-carbon positions for S188V-3CP and DehE-3CP duri...
<p>(a) RMSF plot for HDAC2-C8 complex (yellow) and HDAC2 without ligand (red). (b) RMSF plot for HDA...
<p>The root-mean-square deviations (RMSDs) of MTHase backbone atoms (blue curve) and all the G<sub>3...
<p>(a) RMS distribution pattern for HDAC2-C8 complex (yellow) and HDAC2 without ligand (red). (b) RM...
A. MD simulation trajectory analysis of Root Mean Square Divisions (RMSD) of ZINC8856727 bound with ...
<p>The first 2 ns correspond to equilibration, and the following 5 ns correspond to the first part o...
First row: Root Mean Square Deviation (RMSD) of wild system and D170A variant system, each system ha...
<p>(A) The MD simulations of 1-17-2 Fab and the 30 mutants. The curves indicate the RMSD value chang...
Explicit analyses of ligand RMSD in 200 ns MD simulation (All units are in nm).</p
<p>A. Plot of root mean square deviation (RMSD) of model 1L P<sub>core</sub> Cα atoms versus simulat...
<p>Over a 10 ns span the RMSD remains very low, below 0.75 Å for trace alpha carbons of the PECr com...
MD Simulation RMSD Plot of C-alpha atoms in proteins and ligands (A) Hesperetin (B) Curcumin (C) Iso...
<p>RMSD for (a) CCR2 and (b) CCR5 Cα from the initial structures throughout the simulation of 5 ns a...
<p>Root mean square deviations (RMSDs) of the alpha-carbon positions during 10,000-ps simulations.</...
<p>The root mean square of deviation (RMSD) (average of all ten parallel simulations in the same con...
<p>Root mean square deviations (RMSDs) of the alpha-carbon positions for S188V-3CP and DehE-3CP duri...
<p>(a) RMSF plot for HDAC2-C8 complex (yellow) and HDAC2 without ligand (red). (b) RMSF plot for HDA...
<p>The root-mean-square deviations (RMSDs) of MTHase backbone atoms (blue curve) and all the G<sub>3...
<p>(a) RMS distribution pattern for HDAC2-C8 complex (yellow) and HDAC2 without ligand (red). (b) RM...
A. MD simulation trajectory analysis of Root Mean Square Divisions (RMSD) of ZINC8856727 bound with ...
<p>The first 2 ns correspond to equilibration, and the following 5 ns correspond to the first part o...
First row: Root Mean Square Deviation (RMSD) of wild system and D170A variant system, each system ha...
<p>(A) The MD simulations of 1-17-2 Fab and the 30 mutants. The curves indicate the RMSD value chang...
Explicit analyses of ligand RMSD in 200 ns MD simulation (All units are in nm).</p
<p>A. Plot of root mean square deviation (RMSD) of model 1L P<sub>core</sub> Cα atoms versus simulat...
<p>Over a 10 ns span the RMSD remains very low, below 0.75 Å for trace alpha carbons of the PECr com...
MD Simulation RMSD Plot of C-alpha atoms in proteins and ligands (A) Hesperetin (B) Curcumin (C) Iso...
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