Publication date
September 2022
DOIAbstract
R1 16S rRNA amplicon time-series OTU count table exported from phyloseqe object. Goes with the taxonomy table. </p
R1 16S rRNA amplicon time-series OTU count table exported from phyloseqe object. Goes with the taxonomy table. </p
Contains taxonomic information and 16S rRNA sequence similarity % for every phylum in Phyla_table
Unrarefied phylum x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phyl...
Rarefied phyla x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phylum....
R1 16S rRNA amplicon time-series taxonomy table for each ASV exported from phyloseq object. Goes wit...
Abigail 16S rRNA amplicon time-series OTU table exported from phyloseq object. Pairs with taxonomy t...
Abigail 16S rRNA amplicon time-series taxonomy table for each ASV exported from phyloseq object. Pai...
This is an excel sheet containing the OTU table of 16S rRNA amplicon pyrosequencing
Contains taxonomic information and 16S rRNA sequence similarity % for every Otu in Otu_table
Supplemental Table 5: 16S rRNA gene amplicon data as relative abundance binned at the class level. ...
Unrarefied OTU table including dilutions series samples and controls. Taxonomy was assigned using th...
Rarefied OTU x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phylum. L...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
Computed statistics for long 16S MinION rRNA reads classified against 16S rRNA sequence databases.</...
<p>‘Others’ contain OTUs with a relative abundance below 0.5% in the entire data set. ‘Unidentified’...
Abundance table containing the number of reads for the Operational Taxonomic Units (OTUs) of particl...
Contains taxonomic information and 16S rRNA sequence similarity % for every phylum in Phyla_table
Unrarefied phylum x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phyl...
Rarefied phyla x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phylum....
R1 16S rRNA amplicon time-series taxonomy table for each ASV exported from phyloseq object. Goes wit...
Abigail 16S rRNA amplicon time-series OTU table exported from phyloseq object. Pairs with taxonomy t...
Abigail 16S rRNA amplicon time-series taxonomy table for each ASV exported from phyloseq object. Pai...
This is an excel sheet containing the OTU table of 16S rRNA amplicon pyrosequencing
Contains taxonomic information and 16S rRNA sequence similarity % for every Otu in Otu_table
Supplemental Table 5: 16S rRNA gene amplicon data as relative abundance binned at the class level. ...
Unrarefied OTU table including dilutions series samples and controls. Taxonomy was assigned using th...
Rarefied OTU x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phylum. L...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
Computed statistics for long 16S MinION rRNA reads classified against 16S rRNA sequence databases.</...
<p>‘Others’ contain OTUs with a relative abundance below 0.5% in the entire data set. ‘Unidentified’...
Abundance table containing the number of reads for the Operational Taxonomic Units (OTUs) of particl...
Contains taxonomic information and 16S rRNA sequence similarity % for every phylum in Phyla_table
Unrarefied phylum x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phyl...
Rarefied phyla x sampleID tables (there are 6 tables for 6 taxonomic levels, species through phylum....
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