Additional file 3 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

Additional file 4: of Sex-specific lipid molecular signatures in obesity-associated metabolic dysfunctions revealed by lipidomic characterization in ob/ob mouse

Marcela González-Granillo (6405251)
Luisa Helguero (3779611)
Eliana Alves (349723)
Amena Archer (251822)
Christina Savva (6405254)
Matteo Pedrelli (545877)
Osman Ahmed (524943)
Xidan Li (479706)
Maria Domingues (6405257)
Paolo Parini (87438)
Jan-Åke Gustafsson (4846)
Marion Korach-André (361335)

February 2019

Figure S4. Hepatic gene expression levels in F WT (♀ pink bullets), M WT (♂ blue triangles), F ERαKO...

Additional file 1: of Induction of tolerogenic dendritic cells by activated TGF-Î˛/Akt/Smad2 signaling in RIG-I-deficient stemness-high human liver cancer cells

Ming Zhong (151097)
Cheng Zhong (573294)
Wen Cui (3070767)
Guanghui Wang (51854)
Gongpu Zheng (6700988)
Li Li (14993)
Jing Zhang (23775)
Rujing Ren (583466)
Huijei Gao (6700991)
Tingting Wang (123983)
Xin Li (51274)
Jiantu Che (6700994)
Eiichi Gohda (6700997)

May 2019

Figure S1. RIG-I knocked-down SMMC-7721 and Bel-7402 cell lines and Akt knocked-down SMMC-7721 cell ...

Additional file 3: of Cholesterol synthesis pathway genes in prostate cancer are transcriptionally downregulated when tissue confounding is minimized

Morten Rye (725101)
Helena Bertilsson (406101)
Maria Andersen (3876898)
Kjersti Rise (3523298)
Tone Bathen (3469859)
Finn DrablĂ¸s (3571844)
May-Britt Tessem (406107)

April 2018

Fold-changes from the studies by Baetke et al... and Mortensen et al. (XLS 36 kb

Additional file 2 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

Haibo Cao (267918)
Ran Zhuo (395817)
Zimu Zhang (5744795)
Jianwei Wang (128689)
Yanfang Tao (9694025)
Randong Yang (13807828)
Xinyi Guo (3755509)
Yanling Chen (498235)
Siqi Jia (8332686)
Ye Yao (348477)
Pengcheng Yang (104213)
Juanjuan Yu (2172736)
Wanyan Jiao (13815323)
Xiaolu Li (586812)
Fang Fang (38179)
Yi Xie (12835)
Gen Li (743590)
Di Wu (23906)
Hairong Wang (1694704)
Chenxi Feng (5891462)
Yunyun Xu (516217)
Zhiheng Li (525468)
Jian Pan (10689341)
Jian Wang (5901)

September 2022

Additional file 2: Differentially expressed genes in INSM2-knockdown SK-N-BE(2) cells with abs(log2(...

Additional file 1 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

Haibo Cao (267918)
Ran Zhuo (395817)
Zimu Zhang (5744795)
Jianwei Wang (128689)
Yanfang Tao (9694025)
Randong Yang (13807828)
Xinyi Guo (3755509)
Yanling Chen (498235)
Siqi Jia (8332686)
Ye Yao (348477)
Pengcheng Yang (104213)
Juanjuan Yu (2172736)
Wanyan Jiao (13815323)
Xiaolu Li (586812)
Fang Fang (38179)
Yi Xie (12835)
Gen Li (743590)
Di Wu (23906)
Hairong Wang (1694704)
Chenxi Feng (5891462)
Yunyun Xu (516217)
Zhiheng Li (525468)
Jian Pan (10689341)
Jian Wang (5901)

September 2022

Additional file 1: Fig.S1. INSM2 expression in GN tissue and NB tissue (GSE147635).Fig. S2. SK-N-BE(...

Additional file 1: of AXL phosphorylates and up-regulates TNS2 and its implications in IRS-1-associated metabolism in cancer cells

Li-Chun Cheng (5956934)
Yen-Lin Chen (317075)
An-Ning Cheng (214436)
Alan Lee (268381)
Chun-Yu Cho (5956937)
Jhy-Shrian Huang (3576050)
Shuang-En Chuang (3576053)

November 2018

The endogous expression of TNS2, p-Axl and Axl in five pancreatic cancer cell lines. Densityometric ...

Additional file 4: of AXL phosphorylates and up-regulates TNS2 and its implications in IRS-1-associated metabolism in cancer cells

Li-Chun Cheng (5956934)
Yen-Lin Chen (317075)
An-Ning Cheng (214436)
Alan Lee (268381)
Chun-Yu Cho (5956937)
Jhy-Shrian Huang (3576050)
Shuang-En Chuang (3576053)

November 2018

Total TNS2 and total AXL expression in pancreatic cancer cells. Both proteins were detected by IHC i...

Additional file 5: of Changes in H3K27ac following lipopolysaccharide stimulation of nasopharyngeal epithelial cells

Lisa Borghini (3548447)
Martin Hibberd (269015)
Sonia Davila (268093)

December 2018

Super-Enhancers analysis. A: Ranked plot of enhancers defined in Control (left) and LPS (right) cond...

Additional file 1: of KPNA2 promotes metabolic reprogramming in glioblastomas by regulation of c-myc

Jie Li (15030)
Qian Liu (135614)
Zihao Liu (4020458)
Qian Xia (336434)
Zihao Zhang (2335846)
Rui Zhang (13940)
Taihong Gao (5639795)
Guangyan Gu (5639798)
Yanan Wang (123548)
Dan Wang (34472)
Xiuyang Chen (5639801)
Yihang Yang (5639804)
Dong He (553311)
Tao Xin (96070)

November 2018

Figure S1. KPNA2 promoted the glycolytic metabolism in the U251 glioblastoma cells. Figure S2. KPNA2...

Additional file 2 of Adipose transplantation improves olfactory function and neurogenesis via PKCα-involved lipid metabolism in Seipin Knockout mice

Jing Yang (13969)
Na Yang (266025)
Huifang Zhao (3341825)
Yan Qiao (444377)
Yanqiu Li (683621)
Chunfang Wang (290482)
Kah-Leong Lim (220390)
Chengwu Zhang (2831969)
Wulin Yang (1338897)
Li Lu (16945167)

September 2023

Additional file 2: Fig. S2. PKCα is associated with lipid metabolism pathways. Chordal diagram showe...

Additional file 1: Table S1. of Membrane-enriched proteome changes and prion protein expression during neural differentiation and in neuroblastoma cells

J. Macedo (3945281)
D. Schrama (3945293)
I. Duarte (3945278)
E. Tavares (3945287)
J. Renaut (3945284)
M. Futschik (3945296)
P. Rodrigues (2178910)
E. Melo (3945290)

April 2017

and Table S2. Oligonucleotides used for qPCR of mouse specific genes & Protein spots differentially ...

Additional file 3: of mTOR and ROS regulation by anethole on adipogenic differentiation in human mesenchymal stem cells

Yun-Hee Rhee (5489927)
Jeong Moon (5489930)
Ji-Hun Mo (652477)
Tiffany Pham (2802823)
Phil-Sang Chung (753488)

July 2018

The raw data of western blot. p-mTOR, p-AMPK, and p-p70S6K in Fig. 2. (JPG 114Â kb

Additional file 2: of Reciprocal regulation of integrin Î˛4 and KLF4 promotes gliomagenesis through maintaining cancer stem cell traits

Binbin Ma (2626351)
Li Zhang (8200)
Yujie Zou (408340)
Ruiping He (4812609)
Qiong Wu (84327)
Chuanchun Han (4812615)
Bo Zhang (6559)

January 2019

Figure S2. (A-D) ITGB4 was knocked down in LN229 and U251 cells using shRNA. The expression levels o...

Additional file 4: of Investigation of lipid metabolism dysregulation and the effects on immune microenvironments in pan-cancer using multiple omics data

Yang Hao (155400)
Daixi Li (5830415)
Yong Xu (17491)
Jian Ouyang (179347)
Yongkun Wang (608397)
Yuqi Zhang (286958)
Baoguo Li (143191)
Lu Xie (55571)
Guangrong Qin (594367)

May 2019

The correlation of transcripition factor and target pairs in key lipidÂ metabolism pathways. (XLSX 5...

Additional file 3: of Reciprocal regulation of integrin Î˛4 and KLF4 promotes gliomagenesis through maintaining cancer stem cell traits

Binbin Ma (2626351)
Li Zhang (8200)
Yujie Zou (408340)
Ruiping He (4812609)
Qiong Wu (84327)
Chuanchun Han (4812615)
Bo Zhang (6559)

January 2019

Figure S3. nuclear and cytosol proteins were isolated from LN229 cells. The expression levels of ITG...

Additional file 4: of Sex-specific lipid molecular signatures in obesity-associated metabolic dysfunctions revealed by lipidomic characterization in ob/ob mouse

Marcela González-Granillo (6405251)
Luisa Helguero (3779611)
Eliana Alves (349723)
Amena Archer (251822)
Christina Savva (6405254)
Matteo Pedrelli (545877)
Osman Ahmed (524943)
Xidan Li (479706)
Maria Domingues (6405257)
Paolo Parini (87438)
Jan-Åke Gustafsson (4846)
Marion Korach-André (361335)

February 2019

Figure S4. Hepatic gene expression levels in F WT (♀ pink bullets), M WT (♂ blue triangles), F ERαKO...

Additional file 1: of Induction of tolerogenic dendritic cells by activated TGF-Î˛/Akt/Smad2 signaling in RIG-I-deficient stemness-high human liver cancer cells

Ming Zhong (151097)
Cheng Zhong (573294)
Wen Cui (3070767)
Guanghui Wang (51854)
Gongpu Zheng (6700988)
Li Li (14993)
Jing Zhang (23775)
Rujing Ren (583466)
Huijei Gao (6700991)
Tingting Wang (123983)
Xin Li (51274)
Jiantu Che (6700994)
Eiichi Gohda (6700997)

May 2019

Figure S1. RIG-I knocked-down SMMC-7721 and Bel-7402 cell lines and Akt knocked-down SMMC-7721 cell ...

Additional file 3: of Cholesterol synthesis pathway genes in prostate cancer are transcriptionally downregulated when tissue confounding is minimized

Morten Rye (725101)
Helena Bertilsson (406101)
Maria Andersen (3876898)
Kjersti Rise (3523298)
Tone Bathen (3469859)
Finn DrablĂ¸s (3571844)
May-Britt Tessem (406107)

April 2018

Fold-changes from the studies by Baetke et al... and Mortensen et al. (XLS 36 kb

Additional file 2 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

Haibo Cao (267918)
Ran Zhuo (395817)
Zimu Zhang (5744795)
Jianwei Wang (128689)
Yanfang Tao (9694025)
Randong Yang (13807828)
Xinyi Guo (3755509)
Yanling Chen (498235)
Siqi Jia (8332686)
Ye Yao (348477)
Pengcheng Yang (104213)
Juanjuan Yu (2172736)
Wanyan Jiao (13815323)
Xiaolu Li (586812)
Fang Fang (38179)
Yi Xie (12835)
Gen Li (743590)
Di Wu (23906)
Hairong Wang (1694704)
Chenxi Feng (5891462)
Yunyun Xu (516217)
Zhiheng Li (525468)
Jian Pan (10689341)
Jian Wang (5901)

September 2022

Additional file 2: Differentially expressed genes in INSM2-knockdown SK-N-BE(2) cells with abs(log2(...

Additional file 1 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

Haibo Cao (267918)
Ran Zhuo (395817)
Zimu Zhang (5744795)
Jianwei Wang (128689)
Yanfang Tao (9694025)
Randong Yang (13807828)
Xinyi Guo (3755509)
Yanling Chen (498235)
Siqi Jia (8332686)
Ye Yao (348477)
Pengcheng Yang (104213)
Juanjuan Yu (2172736)
Wanyan Jiao (13815323)
Xiaolu Li (586812)
Fang Fang (38179)
Yi Xie (12835)
Gen Li (743590)
Di Wu (23906)
Hairong Wang (1694704)
Chenxi Feng (5891462)
Yunyun Xu (516217)
Zhiheng Li (525468)
Jian Pan (10689341)
Jian Wang (5901)

September 2022

Additional file 1: Fig.S1. INSM2 expression in GN tissue and NB tissue (GSE147635).Fig. S2. SK-N-BE(...

Additional file 1: of AXL phosphorylates and up-regulates TNS2 and its implications in IRS-1-associated metabolism in cancer cells

Li-Chun Cheng (5956934)
Yen-Lin Chen (317075)
An-Ning Cheng (214436)
Alan Lee (268381)
Chun-Yu Cho (5956937)
Jhy-Shrian Huang (3576050)
Shuang-En Chuang (3576053)

November 2018

The endogous expression of TNS2, p-Axl and Axl in five pancreatic cancer cell lines. Densityometric ...

Additional file 4: of AXL phosphorylates and up-regulates TNS2 and its implications in IRS-1-associated metabolism in cancer cells

Li-Chun Cheng (5956934)
Yen-Lin Chen (317075)
An-Ning Cheng (214436)
Alan Lee (268381)
Chun-Yu Cho (5956937)
Jhy-Shrian Huang (3576050)
Shuang-En Chuang (3576053)

November 2018

Total TNS2 and total AXL expression in pancreatic cancer cells. Both proteins were detected by IHC i...

Additional file 5: of Changes in H3K27ac following lipopolysaccharide stimulation of nasopharyngeal epithelial cells

Lisa Borghini (3548447)
Martin Hibberd (269015)
Sonia Davila (268093)

December 2018

Super-Enhancers analysis. A: Ranked plot of enhancers defined in Control (left) and LPS (right) cond...

Additional file 1: of KPNA2 promotes metabolic reprogramming in glioblastomas by regulation of c-myc

Jie Li (15030)
Qian Liu (135614)
Zihao Liu (4020458)
Qian Xia (336434)
Zihao Zhang (2335846)
Rui Zhang (13940)
Taihong Gao (5639795)
Guangyan Gu (5639798)
Yanan Wang (123548)
Dan Wang (34472)
Xiuyang Chen (5639801)
Yihang Yang (5639804)
Dong He (553311)
Tao Xin (96070)

November 2018

Figure S1. KPNA2 promoted the glycolytic metabolism in the U251 glioblastoma cells. Figure S2. KPNA2...

Additional file 2 of Adipose transplantation improves olfactory function and neurogenesis via PKCα-involved lipid metabolism in Seipin Knockout mice

Jing Yang (13969)
Na Yang (266025)
Huifang Zhao (3341825)
Yan Qiao (444377)
Yanqiu Li (683621)
Chunfang Wang (290482)
Kah-Leong Lim (220390)
Chengwu Zhang (2831969)
Wulin Yang (1338897)
Li Lu (16945167)

September 2023

Additional file 2: Fig. S2. PKCα is associated with lipid metabolism pathways. Chordal diagram showe...

Additional file 1: Table S1. of Membrane-enriched proteome changes and prion protein expression during neural differentiation and in neuroblastoma cells

J. Macedo (3945281)
D. Schrama (3945293)
I. Duarte (3945278)
E. Tavares (3945287)
J. Renaut (3945284)
M. Futschik (3945296)
P. Rodrigues (2178910)
E. Melo (3945290)

April 2017

and Table S2. Oligonucleotides used for qPCR of mouse specific genes & Protein spots differentially ...

Additional file 3: of mTOR and ROS regulation by anethole on adipogenic differentiation in human mesenchymal stem cells

Yun-Hee Rhee (5489927)
Jeong Moon (5489930)
Ji-Hun Mo (652477)
Tiffany Pham (2802823)
Phil-Sang Chung (753488)

July 2018

The raw data of western blot. p-mTOR, p-AMPK, and p-p70S6K in Fig. 2. (JPG 114Â kb

Additional file 2: of Reciprocal regulation of integrin Î˛4 and KLF4 promotes gliomagenesis through maintaining cancer stem cell traits

Binbin Ma (2626351)
Li Zhang (8200)
Yujie Zou (408340)
Ruiping He (4812609)
Qiong Wu (84327)
Chuanchun Han (4812615)
Bo Zhang (6559)

January 2019

Figure S2. (A-D) ITGB4 was knocked down in LN229 and U251 cells using shRNA. The expression levels o...

Additional file 4: of Investigation of lipid metabolism dysregulation and the effects on immune microenvironments in pan-cancer using multiple omics data

Yang Hao (155400)
Daixi Li (5830415)
Yong Xu (17491)
Jian Ouyang (179347)
Yongkun Wang (608397)
Yuqi Zhang (286958)
Baoguo Li (143191)
Lu Xie (55571)
Guangrong Qin (594367)

May 2019

The correlation of transcripition factor and target pairs in key lipidÂ metabolism pathways. (XLSX 5...

Additional file 3: of Reciprocal regulation of integrin Î˛4 and KLF4 promotes gliomagenesis through maintaining cancer stem cell traits

Binbin Ma (2626351)
Li Zhang (8200)
Yujie Zou (408340)
Ruiping He (4812609)
Qiong Wu (84327)
Chuanchun Han (4812615)
Bo Zhang (6559)

January 2019

Figure S3. nuclear and cytosol proteins were isolated from LN229 cells. The expression levels of ITG...

Additional file 4: of Sex-specific lipid molecular signatures in obesity-associated metabolic dysfunctions revealed by lipidomic characterization in ob/ob mouse

Marcela González-Granillo (6405251)
Luisa Helguero (3779611)
Eliana Alves (349723)
Amena Archer (251822)
Christina Savva (6405254)
Matteo Pedrelli (545877)
Osman Ahmed (524943)
Xidan Li (479706)
Maria Domingues (6405257)
Paolo Parini (87438)
Jan-Åke Gustafsson (4846)
Marion Korach-André (361335)

February 2019

Figure S4. Hepatic gene expression levels in F WT (♀ pink bullets), M WT (♂ blue triangles), F ERαKO...

Additional file 1: of Induction of tolerogenic dendritic cells by activated TGF-Î˛/Akt/Smad2 signaling in RIG-I-deficient stemness-high human liver cancer cells

Ming Zhong (151097)
Cheng Zhong (573294)
Wen Cui (3070767)
Guanghui Wang (51854)
Gongpu Zheng (6700988)
Li Li (14993)
Jing Zhang (23775)
Rujing Ren (583466)
Huijei Gao (6700991)
Tingting Wang (123983)
Xin Li (51274)
Jiantu Che (6700994)
Eiichi Gohda (6700997)

May 2019

Figure S1. RIG-I knocked-down SMMC-7721 and Bel-7402 cell lines and Akt knocked-down SMMC-7721 cell ...

Additional file 3: of Cholesterol synthesis pathway genes in prostate cancer are transcriptionally downregulated when tissue confounding is minimized

Morten Rye (725101)
Helena Bertilsson (406101)
Maria Andersen (3876898)
Kjersti Rise (3523298)
Tone Bathen (3469859)
Finn DrablĂ¸s (3571844)
May-Britt Tessem (406107)

April 2018

Fold-changes from the studies by Baetke et al... and Mortensen et al. (XLS 36 kb

Additional file 3 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

Abstract

Extracted data

Additional file 3 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

Abstract

Extracted data

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