Intriguing transport phenomena of phonons and photons in nanoporous structures have revolutionized the development of materials in recent decades. The particle- and wave-like transport of phonons have respectively demonstrated significant thermal conductivity reduction in thermoelectrics and backscattering-immune waveguiding in topological insulators; the photon transport in nanoporous composites have demonstrated enhanced solar reflectivity for radiative cooling. This doctoral research focuses on understanding phonon and photon transport in nanoporous structures that will guide optimal designs of thermoelectric energy harvesting systems, future phononic circuits, and hierarchical materials for optical and thermal management. Phonon ...