Additional file 6: Figure S4. Quantile–quantile (QQ) plots of the association analyses for (a) IMF percentage, (b) TG content, (c) CHO content, and (d) PL content using linear mixed model. The grey areas in the QQ plots represent the 95% confidence intervals around the test statistics
Differentially expressed genes identified in RNA sequencing in divergent RFI individuals. (XLS 37Â k...
Figure S9. Manhattan plot showing the association of SNPs with CAV3 expression. Black line represent...
Figure S6. Gene environment of the region of interest for WS on GGA18. The first track corresponds t...
Additional file 5: Figure S3. Quantile–quantile (QQ) plot of the association analysis for breast mus...
Additional file 2: Table S1. Number of clean reads and mapping rate of the 399 samples
Additional file 13: Table S10. Results from LMM and Pearson correlation analyses for IMF percentage
Additional file 4: Table S2. Values of tuning parameters used in LASSO-1SE and EN-1SE in association...
Additional file 3: Figure S2. Hierarchical clustering dendrogram of the traits analyzed
Additional file 9: Table S6. Rank of candidate genes for breast muscle weight within co-expression n...
Additional file 8: Table S4. GO terms enriched in the WGCNA modules correlated with breast muscle we...
Additional file 7: Table S3. Genes in each WGCNA module for breast muscle weight
Additional file 11: Table S8. GO terms enriched in the WGCNA modules correlated with IMF contents
Abstract Background In broiler production, breast muscle weight and intramuscular fat (IMF) content ...
Additional file 12: Table S9. KEGG pathway enriched in the WGCNA modules correlated with IMF content...
Figure S8. Manhattan plot showing the association of SNPs with MYH1F expression. Black line represen...
Differentially expressed genes identified in RNA sequencing in divergent RFI individuals. (XLS 37Â k...
Figure S9. Manhattan plot showing the association of SNPs with CAV3 expression. Black line represent...
Figure S6. Gene environment of the region of interest for WS on GGA18. The first track corresponds t...
Additional file 5: Figure S3. Quantile–quantile (QQ) plot of the association analysis for breast mus...
Additional file 2: Table S1. Number of clean reads and mapping rate of the 399 samples
Additional file 13: Table S10. Results from LMM and Pearson correlation analyses for IMF percentage
Additional file 4: Table S2. Values of tuning parameters used in LASSO-1SE and EN-1SE in association...
Additional file 3: Figure S2. Hierarchical clustering dendrogram of the traits analyzed
Additional file 9: Table S6. Rank of candidate genes for breast muscle weight within co-expression n...
Additional file 8: Table S4. GO terms enriched in the WGCNA modules correlated with breast muscle we...
Additional file 7: Table S3. Genes in each WGCNA module for breast muscle weight
Additional file 11: Table S8. GO terms enriched in the WGCNA modules correlated with IMF contents
Abstract Background In broiler production, breast muscle weight and intramuscular fat (IMF) content ...
Additional file 12: Table S9. KEGG pathway enriched in the WGCNA modules correlated with IMF content...
Figure S8. Manhattan plot showing the association of SNPs with MYH1F expression. Black line represen...
Differentially expressed genes identified in RNA sequencing in divergent RFI individuals. (XLS 37Â k...
Figure S9. Manhattan plot showing the association of SNPs with CAV3 expression. Black line represent...
Figure S6. Gene environment of the region of interest for WS on GGA18. The first track corresponds t...