Data set used for TreeMix and F4 analyses. The data is in plink stratified allele frequency format, which can be converted to work in TreeMix and F4 using TreeMix's inbuilt conversion script. For more details see the TreeMix Bitbucket site: https://bitbucket.org/nygcresearch/treemix/wiki/Home F4 is available to download here: https://github.com/mmatschiner/F
Full metagenomic dataset for this study, generated by a 454 FLX sequencer. More details on samples a...
This compressed directory contains the allele frequency estimates for the L11 and L14 lines, subline...
International audienceFSuite is a user friendly pipeline developed for exploiting inbreeding informa...
Data set used for TreeMix and F4 analyses. The data is in plink stratified allele frequency format, ...
This is the input file used to conduct the f3 admixture tests. The file contains seven "populations"...
Binary plink files used for treemix study. Contains individuals and their SNPs after implementing th...
Treemix and D-statistic input files in .ped and treemix formats along with output file of D-statisti...
This file contains allele frequency data for each of the 14 populations used in the fst-pst analyses...
Data file with alleles for 4 microsatellite markers used to run analyses in the program STRUCTURE fo...
This file contains the genotype data for all trees examined in this study. The data have been format...
<p>Population splitting tree generated by Treemix based on SNP allele frequency.</p
Nexus file with final alignment of phased FGBI5 sequences used in *BEAST analyses. See ReadMe file t...
The SNP matrix files used in the Treemix analysis of each candidate region. Files are labeled by sca...
Coptodon population genetic data. PLINK formatted files, nexus phylogenetic alignments, and STRUCTUR...
The filtered SNP dataset used in Barth et al. as PLINK/MERLIN/Haploview text genotype table (.ped), ...
Full metagenomic dataset for this study, generated by a 454 FLX sequencer. More details on samples a...
This compressed directory contains the allele frequency estimates for the L11 and L14 lines, subline...
International audienceFSuite is a user friendly pipeline developed for exploiting inbreeding informa...
Data set used for TreeMix and F4 analyses. The data is in plink stratified allele frequency format, ...
This is the input file used to conduct the f3 admixture tests. The file contains seven "populations"...
Binary plink files used for treemix study. Contains individuals and their SNPs after implementing th...
Treemix and D-statistic input files in .ped and treemix formats along with output file of D-statisti...
This file contains allele frequency data for each of the 14 populations used in the fst-pst analyses...
Data file with alleles for 4 microsatellite markers used to run analyses in the program STRUCTURE fo...
This file contains the genotype data for all trees examined in this study. The data have been format...
<p>Population splitting tree generated by Treemix based on SNP allele frequency.</p
Nexus file with final alignment of phased FGBI5 sequences used in *BEAST analyses. See ReadMe file t...
The SNP matrix files used in the Treemix analysis of each candidate region. Files are labeled by sca...
Coptodon population genetic data. PLINK formatted files, nexus phylogenetic alignments, and STRUCTUR...
The filtered SNP dataset used in Barth et al. as PLINK/MERLIN/Haploview text genotype table (.ped), ...
Full metagenomic dataset for this study, generated by a 454 FLX sequencer. More details on samples a...
This compressed directory contains the allele frequency estimates for the L11 and L14 lines, subline...
International audienceFSuite is a user friendly pipeline developed for exploiting inbreeding informa...
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