Publication date
November 2016
DOIAbstract
Treemix and D-statistic input files in .ped and treemix formats along with output file of D-statistics (four-population tests)
Treemix and D-statistic input files in .ped and treemix formats along with output file of D-statistics (four-population tests)
(a) Maximum likelihood graph and 3 included migration events estimated by TreeMix. Contains populati...
<p>These are some example data files for doing 4D STEM using pyxem. </p>
Input file used to construct neighbor joining tree using PHYLIP. Population IDs, 1-36, defined in c...
Treemix and D-statistic input files in .ped and treemix formats along with output file of D-statisti...
This is the input file used to conduct the f3 admixture tests. The file contains seven "populations"...
Data set used for TreeMix and F4 analyses. The data is in plink stratified allele frequency format, ...
Samples collected in the field. RADseq data processed as explained in the text with program AftrRAD ...
A folder containing the .loci file with genomic data and three parameter files to recreate partition...
This compressed directory contains the files we used to conduct the treemix analysis. This includes ...
Population order file for the TreeMix analyses of the three species of Poso Oryzias and their outgro...
The SNP matrix files used in the Treemix analysis of each candidate region. Files are labeled by sca...
File with population assignments for the samples: a two column text file with the sample ids in the ...
This file includes for each tree an identifier, two population structure coefficients (q1 and q2), 1...
Input file for DnaSP grouped by population. This is the same file used to create the Arlequin input ...
Tree files from ML and SNAPP analysis, including the results presented in the following manuscript f...
(a) Maximum likelihood graph and 3 included migration events estimated by TreeMix. Contains populati...
<p>These are some example data files for doing 4D STEM using pyxem. </p>
Input file used to construct neighbor joining tree using PHYLIP. Population IDs, 1-36, defined in c...
Treemix and D-statistic input files in .ped and treemix formats along with output file of D-statisti...
This is the input file used to conduct the f3 admixture tests. The file contains seven "populations"...
Data set used for TreeMix and F4 analyses. The data is in plink stratified allele frequency format, ...
Samples collected in the field. RADseq data processed as explained in the text with program AftrRAD ...
A folder containing the .loci file with genomic data and three parameter files to recreate partition...
This compressed directory contains the files we used to conduct the treemix analysis. This includes ...
Population order file for the TreeMix analyses of the three species of Poso Oryzias and their outgro...
The SNP matrix files used in the Treemix analysis of each candidate region. Files are labeled by sca...
File with population assignments for the samples: a two column text file with the sample ids in the ...
This file includes for each tree an identifier, two population structure coefficients (q1 and q2), 1...
Input file for DnaSP grouped by population. This is the same file used to create the Arlequin input ...
Tree files from ML and SNAPP analysis, including the results presented in the following manuscript f...
(a) Maximum likelihood graph and 3 included migration events estimated by TreeMix. Contains populati...
<p>These are some example data files for doing 4D STEM using pyxem. </p>
Input file used to construct neighbor joining tree using PHYLIP. Population IDs, 1-36, defined in c...
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