Variant call file listing genotypes for the all SNPs in the initial scan in the vicinity of SNPs targeted for amplicon sequencing (including sites that did not meet our strict filtering requirements in the initial scan)
<p>Variant positions in captured genes (on target) identified after basic filtering (at least 5-fold...
Figure S2. Variability of allele depths. The known driver mutations are shown along with another foc...
Background: Targeted deep sequencing is a highly effective technology to identify known and novel si...
Variant call file listing genotypes for the all SNPs in the initial scan in the vicinity of SNPs tar...
Variant call file listing genotypes for filtered SNPs after amplicon sequencing used in downstream a...
Variant call file listing genotypes for the filtered set of SNPs in the initial scan used in downstr...
Filtered SNPs that have undergone VariantFiltration and also selection for presence in 75% of indivi...
Variant Call Format files for chromosome encoded SNPs/InDels identified for each isolate from this s...
Filtered SNPs that have undergone VariantFiltration and also selection for presence in 75% of indivi...
These are scripts we used for SNP variant calling. The locuslist provides a list of specific SNPs wh...
<p>Variant caller sensitivity for detecting the manually curated mutations for SNVs and indels are s...
As whole-genome sequencing technologies improve and accurate maps of the entire genome are assembled...
SNP data in standard VCF format. Target genomic intervals for variant calling were identified using ...
The final product of our variant calling pipeline; obtained as described under: "Variant calling, fi...
abstract: Analyzing human DNA sequence data allows researchers to identify variants associated with ...
<p>Variant positions in captured genes (on target) identified after basic filtering (at least 5-fold...
Figure S2. Variability of allele depths. The known driver mutations are shown along with another foc...
Background: Targeted deep sequencing is a highly effective technology to identify known and novel si...
Variant call file listing genotypes for the all SNPs in the initial scan in the vicinity of SNPs tar...
Variant call file listing genotypes for filtered SNPs after amplicon sequencing used in downstream a...
Variant call file listing genotypes for the filtered set of SNPs in the initial scan used in downstr...
Filtered SNPs that have undergone VariantFiltration and also selection for presence in 75% of indivi...
Variant Call Format files for chromosome encoded SNPs/InDels identified for each isolate from this s...
Filtered SNPs that have undergone VariantFiltration and also selection for presence in 75% of indivi...
These are scripts we used for SNP variant calling. The locuslist provides a list of specific SNPs wh...
<p>Variant caller sensitivity for detecting the manually curated mutations for SNVs and indels are s...
As whole-genome sequencing technologies improve and accurate maps of the entire genome are assembled...
SNP data in standard VCF format. Target genomic intervals for variant calling were identified using ...
The final product of our variant calling pipeline; obtained as described under: "Variant calling, fi...
abstract: Analyzing human DNA sequence data allows researchers to identify variants associated with ...
<p>Variant positions in captured genes (on target) identified after basic filtering (at least 5-fold...
Figure S2. Variability of allele depths. The known driver mutations are shown along with another foc...
Background: Targeted deep sequencing is a highly effective technology to identify known and novel si...