Publication date
February 2016
DOIAbstract
This is the input file (called the control file) for lineage diversification analysis in BAMM. The file was directly adapted from the documentation on the BAMM website (http://bamm-project.org/)
This is the input file (called the control file) for lineage diversification analysis in BAMM. The file was directly adapted from the documentation on the BAMM website (http://bamm-project.org/)
BAM file of read alignments used to call variants in the Nitzschia sp. Nitz4 genome. The BAM file wa...
This file is a compressed folder of the matrices containing sampling information for the diversifica...
The data consist of MIseq amplicon reads mapped to the file available in 'A2 reference for read mapp...
This is the input file (called the control file) for analysis of trait evolution in BAMM. The file w...
Script used in the R program BAMMtools for the analysis and visualization of lineage diversification...
Input and output files of BAMM analyses conducted under six different values for the prior on the ex...
Control files and sampling ratios for running BAMM analyses on the provided primate phylogenies
Files used in diversification analyses in Revbayes and BAMM, including Revbayes and R scripts and su...
File specifying species-specific sampling fractions used in the BAMM diversification rates analysis....
Phylogenetic tree in newick format used in the BAMM diversification rate analysis. Taxon names of so...
Archive of all data files and scripts needed to reproduce population genetic results, as well as our...
This R script generates input files for the BAMM analyses conducted in this study
Figure S3. Maximum shift credibility tree from BAMM showing diversification rate shifts across Squam...
Figure S4. Maximum shift credibility tree from BAMM showing diversification rate shifts across Squam...
SummaryWe present bammds, a practical tool that allows visualization of samples sequenced by second-...
BAM file of read alignments used to call variants in the Nitzschia sp. Nitz4 genome. The BAM file wa...
This file is a compressed folder of the matrices containing sampling information for the diversifica...
The data consist of MIseq amplicon reads mapped to the file available in 'A2 reference for read mapp...
This is the input file (called the control file) for analysis of trait evolution in BAMM. The file w...
Script used in the R program BAMMtools for the analysis and visualization of lineage diversification...
Input and output files of BAMM analyses conducted under six different values for the prior on the ex...
Control files and sampling ratios for running BAMM analyses on the provided primate phylogenies
Files used in diversification analyses in Revbayes and BAMM, including Revbayes and R scripts and su...
File specifying species-specific sampling fractions used in the BAMM diversification rates analysis....
Phylogenetic tree in newick format used in the BAMM diversification rate analysis. Taxon names of so...
Archive of all data files and scripts needed to reproduce population genetic results, as well as our...
This R script generates input files for the BAMM analyses conducted in this study
Figure S3. Maximum shift credibility tree from BAMM showing diversification rate shifts across Squam...
Figure S4. Maximum shift credibility tree from BAMM showing diversification rate shifts across Squam...
SummaryWe present bammds, a practical tool that allows visualization of samples sequenced by second-...
BAM file of read alignments used to call variants in the Nitzschia sp. Nitz4 genome. The BAM file wa...
This file is a compressed folder of the matrices containing sampling information for the diversifica...
The data consist of MIseq amplicon reads mapped to the file available in 'A2 reference for read mapp...
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