Beast XML input files for EBSP analyses

The XML input files for the Extended Bayesian Skyline Plots presented in Figure 6. ebspuppertennessee.xml is the input file for Figure 6a, ebspuppertennesseenuclear.xml is the input file for Figure 6b, ebspsfholston.xml is the input file for Figure 6c, and ebspclinch.xml is the input file for Figure 6d. The codes used to designate individuals in these files may be converted to the names of each individual listed in Appendices S2, S4 and S5 using the files tableofcytochromebsequences.xlsx and tableofnuclearsequences.xlsx