Figure S1. K-mer plots of wild P. yedoensis (Pyn) and âYoshino cherryâ (Pxy) accessions. Figure S2. A workflow of genome assembly and annotation. Figure S3. Chromosomal comparison of the gene-phased genome assembly of wild P. yedoensis (Pyn) with the P. avium (Pa) and P. mume (Pm) genomes. Figure S4. A maximum likelihood tree of S-locus genes showing the phylogenetic relationship among the S haplotypes. (DOCX 670 kb
Additional file 1: TableS1. Summary of sequencing data quality. Table S2. Gene composition in the pl...
Table S1. Sequencing summary of 480 peach accessions. Table S8. Putative domestication sweeps. Table...
Figure S1. Genetic diversity of the 480 peach accessions. Figure S2. Manhattan plot and QQ plot of g...
Table S1. Statistics of genome sequence data of wild P. yedoensis (Pyn-Jeju2) used in this study. (X...
Table S2. Statistics of transcriptome sequence data of wild P. yedoensis (Pyn-Jeju2) used in this st...
Table S4. Summary of repetitive sequences identified in the draft genome of wild P. yedoensis. (XLSX...
Table S5. Statistics of gene models predicted from the draft genome of wild P. yedoensis. (XLSX 10 k...
Table S9. Over- or under-represented gene families in the wild P. yedoensis genome compared to the P...
Table S3. Evaluation of gene space coverage of the wild P. yedoensis genome using transcriptome unig...
Table S11. Comparison of the chloroplast genomes between Prunus accessions. (XLSX 10 kb
Table S8. Coverage of individual chromosomes of peach (Pp), sweet cherry (Pa), and Chinese plum (Pm)...
Table S10. Summary of accessions and Illumina short-read data used in whole-genome resequencing anal...
Table S7. Summary of alternative splicing events identified in protein-coding genes. (XLSX 10 kb
Figure S1. Workflow of STRUCTURE 2.3.4 software implementation at MCIA cluster nodes. Figure S2. Gen...
Abstract Background Hybridization is an important evolutionary process that results in increased pla...
Additional file 1: TableS1. Summary of sequencing data quality. Table S2. Gene composition in the pl...
Table S1. Sequencing summary of 480 peach accessions. Table S8. Putative domestication sweeps. Table...
Figure S1. Genetic diversity of the 480 peach accessions. Figure S2. Manhattan plot and QQ plot of g...
Table S1. Statistics of genome sequence data of wild P. yedoensis (Pyn-Jeju2) used in this study. (X...
Table S2. Statistics of transcriptome sequence data of wild P. yedoensis (Pyn-Jeju2) used in this st...
Table S4. Summary of repetitive sequences identified in the draft genome of wild P. yedoensis. (XLSX...
Table S5. Statistics of gene models predicted from the draft genome of wild P. yedoensis. (XLSX 10 k...
Table S9. Over- or under-represented gene families in the wild P. yedoensis genome compared to the P...
Table S3. Evaluation of gene space coverage of the wild P. yedoensis genome using transcriptome unig...
Table S11. Comparison of the chloroplast genomes between Prunus accessions. (XLSX 10 kb
Table S8. Coverage of individual chromosomes of peach (Pp), sweet cherry (Pa), and Chinese plum (Pm)...
Table S10. Summary of accessions and Illumina short-read data used in whole-genome resequencing anal...
Table S7. Summary of alternative splicing events identified in protein-coding genes. (XLSX 10 kb
Figure S1. Workflow of STRUCTURE 2.3.4 software implementation at MCIA cluster nodes. Figure S2. Gen...
Abstract Background Hybridization is an important evolutionary process that results in increased pla...
Additional file 1: TableS1. Summary of sequencing data quality. Table S2. Gene composition in the pl...
Table S1. Sequencing summary of 480 peach accessions. Table S8. Putative domestication sweeps. Table...
Figure S1. Genetic diversity of the 480 peach accessions. Figure S2. Manhattan plot and QQ plot of g...