Additional file 8: Movie S1. Temporal changes in gene expression post-PH in the KEGG cell-cycle pathway. Animated expression changes post-PH in the KEGG cell-cycle pathway. At each time point between 0 h and 4 weeks, the gene nodes in the KEGG cell-cycle pathway were colored using the “pathview” R package [13]. Genes are colored as in Additional file 2: Figure S2d
List of genes in the KEGG cell cycle pathway that are found expressed in our data set. (XLSX 27Â kb
<p>The graphs show the number of differentially expressed genes in each functional category. P value...
Additional file 2: Figure S2. Heatmap showing the intersection of the most differentially expressed ...
Additional file 9: Figures S3. (A–E) Additional examples of transcriptional gene activity post-PH. D...
Additional file 5: Figure S2. (A) Distribution of silhouette scores as a result of the PAM clusterin...
Additional file 4: Table S2. List of genes in Set 3 with their associated classification in Sets 3.1...
Additional file 10: Figure S5. RNA abundance of the acute-response Saa genes post-PH. RNA-seq RPKM v...
Additional file 7: Figure S4. Pol II, H3K36me2 and H3K36me3 densities at 60 h post-PH for the Cebpa ...
Additional file 11: Figure S6. Pol II, H3K36me2 and H3K36me3 densities at 60 h post-PH for the Alb g...
Differentially expressed genes involved in the lysosome pathway. Color scale indicates the log trans...
Differentially expressed genes involved in the 2-oxocarboxylic acid metabolism pathway. Color scale ...
Additional file 6: Table S3. Complete list of GO terms associated with genes in Sets 1â3.7 with th...
Additional file 1: Fig. S1. (A) Description of the mouse liver regeneration stages, collection time ...
Differentially expressed genes involved in the calcium signaling pathway. Color scale indicates the ...
Differentially expressed genes involved in the pyruvate metabolism pathway. Color scale indicates th...
List of genes in the KEGG cell cycle pathway that are found expressed in our data set. (XLSX 27Â kb
<p>The graphs show the number of differentially expressed genes in each functional category. P value...
Additional file 2: Figure S2. Heatmap showing the intersection of the most differentially expressed ...
Additional file 9: Figures S3. (A–E) Additional examples of transcriptional gene activity post-PH. D...
Additional file 5: Figure S2. (A) Distribution of silhouette scores as a result of the PAM clusterin...
Additional file 4: Table S2. List of genes in Set 3 with their associated classification in Sets 3.1...
Additional file 10: Figure S5. RNA abundance of the acute-response Saa genes post-PH. RNA-seq RPKM v...
Additional file 7: Figure S4. Pol II, H3K36me2 and H3K36me3 densities at 60 h post-PH for the Cebpa ...
Additional file 11: Figure S6. Pol II, H3K36me2 and H3K36me3 densities at 60 h post-PH for the Alb g...
Differentially expressed genes involved in the lysosome pathway. Color scale indicates the log trans...
Differentially expressed genes involved in the 2-oxocarboxylic acid metabolism pathway. Color scale ...
Additional file 6: Table S3. Complete list of GO terms associated with genes in Sets 1â3.7 with th...
Additional file 1: Fig. S1. (A) Description of the mouse liver regeneration stages, collection time ...
Differentially expressed genes involved in the calcium signaling pathway. Color scale indicates the ...
Differentially expressed genes involved in the pyruvate metabolism pathway. Color scale indicates th...
List of genes in the KEGG cell cycle pathway that are found expressed in our data set. (XLSX 27Â kb
<p>The graphs show the number of differentially expressed genes in each functional category. P value...
Additional file 2: Figure S2. Heatmap showing the intersection of the most differentially expressed ...