Tissue-specific Indices of Cattle LncRNAs. The calculated tissue-specific indices (TSI) for each lncRNA in each tissue. The “TSI A” and “TSI B” columns are the TSI calculated for each biological replicate. The “TSI Both” column is the F1 score of the TSI from both replicates. F1 is calculated as (2 * A * B) / (A + B) where A is TSI A and B is TSI. The “Name” and “Location” columns give the ID and genomic location of the lncRNA, and the following columns are the FPKM values from each library. (XLSX 1122 kb
RT-PCR Gel Images for Validation. Gel images from a few RT-PCRs to verify a few of the predicted lnc...
Expression of Chicken LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries pe...
Exon Locations of Pig LncRNAs. The genomic locations of the exons of all pig lncRNAs. (GTF 9045 kb
Tissue-specific Indices of Pig LncRNAs. The calculated tissue-specific indices (TSI) for each lncRNA...
Tissue-specific Indices of Chicken LncRNAs. The calculated tissue-specific indices (TSI) for each ln...
GO terms associate with tissue-specific lncRNAs in cattle. This file contains tables from the DAVID ...
LncRNA Classes from Cattle. The output from the FEELnc Classifier program, which finds nearby protei...
Exon Locations of Cattle LncRNAs. The genomic locations of the exons of all cattle lncRNAs. (GTF 435...
FEELnc Coding Potential Scores for Cattle LncRNAs. The coding potential scores calculated by FEELnc....
Sequences of Cattle LncRNAs. A fasta file containing all the lncRNA sequences from cattle. (FA 14461...
GO terms associate with tissue-specific lncRNAs in pigs. This file contains tables from the DAVID an...
Conserved LncRNAs. The 39 groups of orthologous genes across all five species are listed with the as...
LncRNA Classes from Pigs. The output from the FEELnc Classifier program, which finds nearby protein-...
Mapping to NONCODE. The NONCODE IDs for each lncRNA found in the NONCODE database, as described in t...
Expression of Pig LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries per ti...
RT-PCR Gel Images for Validation. Gel images from a few RT-PCRs to verify a few of the predicted lnc...
Expression of Chicken LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries pe...
Exon Locations of Pig LncRNAs. The genomic locations of the exons of all pig lncRNAs. (GTF 9045 kb
Tissue-specific Indices of Pig LncRNAs. The calculated tissue-specific indices (TSI) for each lncRNA...
Tissue-specific Indices of Chicken LncRNAs. The calculated tissue-specific indices (TSI) for each ln...
GO terms associate with tissue-specific lncRNAs in cattle. This file contains tables from the DAVID ...
LncRNA Classes from Cattle. The output from the FEELnc Classifier program, which finds nearby protei...
Exon Locations of Cattle LncRNAs. The genomic locations of the exons of all cattle lncRNAs. (GTF 435...
FEELnc Coding Potential Scores for Cattle LncRNAs. The coding potential scores calculated by FEELnc....
Sequences of Cattle LncRNAs. A fasta file containing all the lncRNA sequences from cattle. (FA 14461...
GO terms associate with tissue-specific lncRNAs in pigs. This file contains tables from the DAVID an...
Conserved LncRNAs. The 39 groups of orthologous genes across all five species are listed with the as...
LncRNA Classes from Pigs. The output from the FEELnc Classifier program, which finds nearby protein-...
Mapping to NONCODE. The NONCODE IDs for each lncRNA found in the NONCODE database, as described in t...
Expression of Pig LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries per ti...
RT-PCR Gel Images for Validation. Gel images from a few RT-PCRs to verify a few of the predicted lnc...
Expression of Chicken LncRNAs. FPKM values for all lncRNAs from each RNA-seq library (2 libraries pe...
Exon Locations of Pig LncRNAs. The genomic locations of the exons of all pig lncRNAs. (GTF 9045 kb