Additional File 1:

Table S1. Results from BLASTp of Oncorhynchus mykiss protein sequences against Salmo salar and MaxQuant output after filtering contaminants, reverse sequences, proteins identified by site, and proteins with only 1 peptide for identification (3076 proteins). Table S2. Imputed protein abundance data after implementing all filtering criteria (2433 proteins). Table S3. Full statistical results from the linear model for each of the 2433 proteins included in the analysis. Table S4. Full results for GO Biological Process (GOBP) enrichment analysis. Table S5. Significantly different proteins that contribute to each significant GOBP term. Table S6. Significantly different proteins that contribute to each significant GO slim term. Table S7. Abbreviations and proteins annotations from STRING. (XLSX 3388 kb