Total base pairs are represented as dark blue bars; Total nucleotide variation as light blue bars; indel, and others as a light green bar; and single nucleotide variation as dark green. * Two-tailed p-value = 0.690; ** p<0.0001; Chi-square with Yates’ correction.</p
<p>NFF: Number of SNV in FF samples, NFFPE: number of SNV in FFPE samples, NPos: number of common po...
A, each individual sequence lined under each other in the consensus numbering order starting from *0...
<p>Trinucleotide mutation frequencies for NA12878 high confidence variants in CDS (blue) and nonCDS ...
Single-nucleotide variations displayed along the aligned sequences of: A)ialB; B) gltA, consensus se...
<p>Variation in the nucleotide sequences of the two-component system coding regions.</p
<p>(A)The name of the fragment, the position of the altered nucleotides and the reference nucleotide...
<p>Dashed line represents genome wide nucleotide diversity (both coding and noncoding sequences), an...
Single nucleotide variations shown across all three sequenced regions (ialB, gltA and rpoB).</p
<p>Non-identical nucleotides for genotypes A, D, F1b and F4 are shown. Nucleotides shared between ge...
<p>Nucleotide and amino acid differences from the CV777 reference sequence AF353511.</p
<p>The percentage of common (grey), exclusively FF (white) and exclusively FFPE (red) single nucleot...
<p>Each estimate of Watterson’s theta per basepair (θw/bp) and nucleotide diversity with Juke’s Cant...
The under-representation increases with increasing number of identical nucleotides following. Each l...
<p>Distribution of very low frequency (VLF) variants across barcode segment. A) Nucleotide. B) Amino...
<p>Only nucleotide variations with a frequency in the mapped reads of at least 20% of the most commo...
<p>NFF: Number of SNV in FF samples, NFFPE: number of SNV in FFPE samples, NPos: number of common po...
A, each individual sequence lined under each other in the consensus numbering order starting from *0...
<p>Trinucleotide mutation frequencies for NA12878 high confidence variants in CDS (blue) and nonCDS ...
Single-nucleotide variations displayed along the aligned sequences of: A)ialB; B) gltA, consensus se...
<p>Variation in the nucleotide sequences of the two-component system coding regions.</p
<p>(A)The name of the fragment, the position of the altered nucleotides and the reference nucleotide...
<p>Dashed line represents genome wide nucleotide diversity (both coding and noncoding sequences), an...
Single nucleotide variations shown across all three sequenced regions (ialB, gltA and rpoB).</p
<p>Non-identical nucleotides for genotypes A, D, F1b and F4 are shown. Nucleotides shared between ge...
<p>Nucleotide and amino acid differences from the CV777 reference sequence AF353511.</p
<p>The percentage of common (grey), exclusively FF (white) and exclusively FFPE (red) single nucleot...
<p>Each estimate of Watterson’s theta per basepair (θw/bp) and nucleotide diversity with Juke’s Cant...
The under-representation increases with increasing number of identical nucleotides following. Each l...
<p>Distribution of very low frequency (VLF) variants across barcode segment. A) Nucleotide. B) Amino...
<p>Only nucleotide variations with a frequency in the mapped reads of at least 20% of the most commo...
<p>NFF: Number of SNV in FF samples, NFFPE: number of SNV in FFPE samples, NPos: number of common po...
A, each individual sequence lined under each other in the consensus numbering order starting from *0...
<p>Trinucleotide mutation frequencies for NA12878 high confidence variants in CDS (blue) and nonCDS ...