Additional file 13: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Methanogenic Microbial Community Composition of Oily Sludge and Its Enrichment Amended with Alkanes Incubated for Over 500 Days

Gu, JD
Mu, BZ
Liu, JF
Mbadinga, SM
Li, W
Wang, LY

January 2012

Methanogenic microbial community is responsive to the availability of hydrocarbons and such informat...

MOESM1 of Phylogeny-structured carbohydrate metabolism across microbiomes collected from different units in wastewater treatment process

Yu Xia (8822)
Francis Chin (3497387)
Yuanqing Chao (1756624)
Tong Zhang (103827)

October 2015

Additional file 1: Table S1. 16S/18S rRNA annotation efficiency of sludge samples collected from dif...

Analysis of microbial community biodiversity in activated sludge from a petrochemical plant

Themis Collares Antunes
Leticia Marconatto
Luiz Gustavo dos Anjos Borges
Adriana Giongo
Sueli Teresinha Van Der Sand

June 2021

The active sludge process is one of the most-used techniques for the biodegradation of organic compo...

Additional file 6: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S3. Distribution of minor phyla with cumulative abundance of <â0.5. (PPTX 43 kb

Additional file 12: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Table S4. Details of different hydrocarbon contaminated samples considered for comparative analysis....

Additional file 7: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S4. Heat map indicating the relative abundance of minor genera with cumulative abundance of 0...

Additional file 3: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S1. Rarefaction curves of the three oily sludge samples (GR1, DB2 and GR3) on the basis of OT...

Additional file 5: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S2. Venn diagram of unique and shared taxa. Unique and shared taxa distribution between 3 sam...

Additional file 11: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S8. Phylogentic tree representing of clade 4 of top 50 most abundant OTUs. Tree was construct...

Additional file 8: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S5. Phylogentic tree representing of clade1 of top 50 most abundant OTUs. Tree was constructe...

Additional file 9: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S6. Phylogentic tree representing of clade 2 of top 50 most abundant OTUs. Tree was construct...

Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy
Pinaki Sar
Jayeeta Sarkar
Avishek Dutta
Poulomi Sarkar
Abhishek Gupta
Balaram Mohapatra
Siddhartha Pal
Sufia K Kazy

October 2018

Abstract Background Sustainable management of voluminous and hazardous oily sludge produced by petro...

Additional file 2: Table S1. of More than 2500Â years of oil exposure shape sediment microbiomes with the potential for syntrophic degradation of hydrocarbons linked to methanogenesis

Antonios Michas (4428142)
Gisle Vestergaard (128321)
Kathleen Trautwein (4428148)
Pavlos Avramidis (4428139)
Dimitris Hatzinikolaou (3470414)
Constantinos Vorgias (4428145)
Heinz Wilkes (1333596)
Ralf Rabus (2556805)
Michael Schloter (140906)
Anne SchĂśler (4428151)

September 2017

Selected genes quantified in Keri Lake metagenomes. The gene subunits and the corresponding Uniprot ...

Additional file 7: Figure S4. of More than 2500 years of oil exposure shape sediment microbiomes with the potential for syntrophic degradation of hydrocarbons linked to methanogenesis

Antonios Michas (4428142)
Gisle Vestergaard (128321)
Kathleen Trautwein (4428148)
Pavlos Avramidis (4428139)
Dimitris Hatzinikolaou (3470414)
Constantinos Vorgias (4428145)
Heinz Wilkes (1333596)
Ralf Rabus (2556805)
Michael Schloter (140906)
Anne Schöler (782457)

September 2017

Distribution and abundance of prokaryotic taxa at different depths of the NE and HE sites. The ten m...

Additional file 3: Table S3. of Metabolic capability and in situ activity of microorganisms in an oil reservoir

Yi-Fan Liu (2901572)
Daniela Galzerani (4741437)
Serge Mbadinga (3455288)
Livia Zaramela (4741440)
Ji-Dong Gu (383457)
Bo-Zhong Mu (2030644)
Karsten Zengler (247723)

January 2018

Taxonomic classification of assembled 16S rRNA gene sequences from metagenomes of W2, W9 and W15. (D...

Methanogenic Microbial Community Composition of Oily Sludge and Its Enrichment Amended with Alkanes Incubated for Over 500 Days

Gu, JD
Mu, BZ
Liu, JF
Mbadinga, SM
Li, W
Wang, LY

January 2012

Methanogenic microbial community is responsive to the availability of hydrocarbons and such informat...

MOESM1 of Phylogeny-structured carbohydrate metabolism across microbiomes collected from different units in wastewater treatment process

Yu Xia (8822)
Francis Chin (3497387)
Yuanqing Chao (1756624)
Tong Zhang (103827)

October 2015

Additional file 1: Table S1. 16S/18S rRNA annotation efficiency of sludge samples collected from dif...

Analysis of microbial community biodiversity in activated sludge from a petrochemical plant

Themis Collares Antunes
Leticia Marconatto
Luiz Gustavo dos Anjos Borges
Adriana Giongo
Sueli Teresinha Van Der Sand

June 2021

The active sludge process is one of the most-used techniques for the biodegradation of organic compo...

Additional file 6: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S3. Distribution of minor phyla with cumulative abundance of <â0.5. (PPTX 43 kb

Additional file 12: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Table S4. Details of different hydrocarbon contaminated samples considered for comparative analysis....

Additional file 7: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S4. Heat map indicating the relative abundance of minor genera with cumulative abundance of 0...

Additional file 3: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S1. Rarefaction curves of the three oily sludge samples (GR1, DB2 and GR3) on the basis of OT...

Additional file 5: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S2. Venn diagram of unique and shared taxa. Unique and shared taxa distribution between 3 sam...

Additional file 11: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S8. Phylogentic tree representing of clade 4 of top 50 most abundant OTUs. Tree was construct...

Additional file 8: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S5. Phylogentic tree representing of clade1 of top 50 most abundant OTUs. Tree was constructe...

Additional file 9: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy (5881004)
Pinaki Sar (551330)
Jayeeta Sarkar (452309)
Avishek Dutta (3833845)
Poulomi Sarkar (5881007)
Abhishek Gupta (402938)
Balaram Mohapatra (1410808)
Siddhartha Pal (1718821)
Sufia Kazy (5881010)

October 2018

Figure S6. Phylogentic tree representing of clade 2 of top 50 most abundant OTUs. Tree was construct...

Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Ajoy Roy
Pinaki Sar
Jayeeta Sarkar
Avishek Dutta
Poulomi Sarkar
Abhishek Gupta
Balaram Mohapatra
Siddhartha Pal
Sufia K Kazy

October 2018

Abstract Background Sustainable management of voluminous and hazardous oily sludge produced by petro...

Additional file 2: Table S1. of More than 2500Â years of oil exposure shape sediment microbiomes with the potential for syntrophic degradation of hydrocarbons linked to methanogenesis

Antonios Michas (4428142)
Gisle Vestergaard (128321)
Kathleen Trautwein (4428148)
Pavlos Avramidis (4428139)
Dimitris Hatzinikolaou (3470414)
Constantinos Vorgias (4428145)
Heinz Wilkes (1333596)
Ralf Rabus (2556805)
Michael Schloter (140906)
Anne SchĂśler (4428151)

September 2017

Selected genes quantified in Keri Lake metagenomes. The gene subunits and the corresponding Uniprot ...

Additional file 7: Figure S4. of More than 2500 years of oil exposure shape sediment microbiomes with the potential for syntrophic degradation of hydrocarbons linked to methanogenesis

Antonios Michas (4428142)
Gisle Vestergaard (128321)
Kathleen Trautwein (4428148)
Pavlos Avramidis (4428139)
Dimitris Hatzinikolaou (3470414)
Constantinos Vorgias (4428145)
Heinz Wilkes (1333596)
Ralf Rabus (2556805)
Michael Schloter (140906)
Anne Schöler (782457)

September 2017

Distribution and abundance of prokaryotic taxa at different depths of the NE and HE sites. The ten m...

Additional file 3: Table S3. of Metabolic capability and in situ activity of microorganisms in an oil reservoir

Yi-Fan Liu (2901572)
Daniela Galzerani (4741437)
Serge Mbadinga (3455288)
Livia Zaramela (4741440)
Ji-Dong Gu (383457)
Bo-Zhong Mu (2030644)
Karsten Zengler (247723)

January 2018

Taxonomic classification of assembled 16S rRNA gene sequences from metagenomes of W2, W9 and W15. (D...

Methanogenic Microbial Community Composition of Oily Sludge and Its Enrichment Amended with Alkanes Incubated for Over 500 Days

Gu, JD
Mu, BZ
Liu, JF
Mbadinga, SM
Li, W
Wang, LY

January 2012

Methanogenic microbial community is responsive to the availability of hydrocarbons and such informat...

MOESM1 of Phylogeny-structured carbohydrate metabolism across microbiomes collected from different units in wastewater treatment process

Yu Xia (8822)
Francis Chin (3497387)
Yuanqing Chao (1756624)
Tong Zhang (103827)

October 2015

Additional file 1: Table S1. 16S/18S rRNA annotation efficiency of sludge samples collected from dif...

Analysis of microbial community biodiversity in activated sludge from a petrochemical plant

Themis Collares Antunes
Leticia Marconatto
Luiz Gustavo dos Anjos Borges
Adriana Giongo
Sueli Teresinha Van Der Sand

June 2021

The active sludge process is one of the most-used techniques for the biodegradation of organic compo...

Additional file 13: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Abstract

Extracted data

Additional file 13: of Petroleum hydrocarbon rich oil refinery sludge of North-East India harbours anaerobic, fermentative, sulfate-reducing, syntrophic and methanogenic microbial populations

Abstract

Extracted data

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