Additional file 3: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Additional file 3 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 3: Supplementary Figure 1. Base composition of known or novel mature miRNAs using we...

Additional file 14 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 14: Supplementary Excel Table S9. Summary of DE miR gene targets shared between Ostr...

Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Moné, Yves
Nhim, Sandra
Gimenez, Sylvie
Legeai, Fabrice
Seninet, Imène
Parrinello, Hugues
NEGRE, Nicolas

January 2018

Background: A change in the environment may impair development or survival of living organisms leadi...

Additional file 6: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Figure S3. MA-plots showing the relative expression of known or novel miR according to the genetic b...

Additional file 10: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S5. Target genes of known miRs and their relative expression in SfC on rice compared to c...

Additional file 2: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S1. Predictions of miR genes by mirDEEP2 in SfC and SfR and orthology table. (XLSX 92 kb

Additional file 11: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S6. Target genes of known miRs and their relative expression in SfR compared to SfC on co...

Additional file 8: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S3. Relative expression resulting from DESEQ2 analysis according to the genetic backgroun...

Additional file 5: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S2. Relative expression resulting from DESEQ2 analysis within strains according to the ho...

Additional file 1: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Table S1. Number of sequence reads in each small non coding RNAs library. (DOCX 14 kb

Additional file 7: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Figure S4. Variation between samples (treatments, replicates) of larvae exposed to different plants ...

Additional file 4: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Figure S2. Variation between samples (treatments, replicates) of larvae exposed to different plants ...

Additional file 9: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S4. List of gene target predictions of known differentially expressed miRs. (XLSX 1578 kb

Additional file 4 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 4: Supplementary Figure 2. MA-plots showing the relative expression of known or nove...

Additional file 13 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 13: Supplementary Excel Table S8. List of DE target genes (FDR < 0.05) of known miRs...

Additional file 3 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 3: Supplementary Figure 1. Base composition of known or novel mature miRNAs using we...

Additional file 14 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 14: Supplementary Excel Table S9. Summary of DE miR gene targets shared between Ostr...

Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Moné, Yves
Nhim, Sandra
Gimenez, Sylvie
Legeai, Fabrice
Seninet, Imène
Parrinello, Hugues
NEGRE, Nicolas

January 2018

Background: A change in the environment may impair development or survival of living organisms leadi...

Additional file 6: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Figure S3. MA-plots showing the relative expression of known or novel miR according to the genetic b...

Additional file 10: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S5. Target genes of known miRs and their relative expression in SfC on rice compared to c...

Additional file 2: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S1. Predictions of miR genes by mirDEEP2 in SfC and SfR and orthology table. (XLSX 92 kb

Additional file 11: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S6. Target genes of known miRs and their relative expression in SfR compared to SfC on co...

Additional file 8: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S3. Relative expression resulting from DESEQ2 analysis according to the genetic backgroun...

Additional file 5: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S2. Relative expression resulting from DESEQ2 analysis within strains according to the ho...

Additional file 1: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Table S1. Number of sequence reads in each small non coding RNAs library. (DOCX 14 kb

Additional file 7: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Figure S4. Variation between samples (treatments, replicates) of larvae exposed to different plants ...

Additional file 4: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Figure S2. Variation between samples (treatments, replicates) of larvae exposed to different plants ...

Additional file 9: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné (361940)
Sandra Nhim (5940560)
Sylvie Gimenez (19584)
Fabrice Legeai (65391)
Imène Seninet (5940569)
Hugues Parrinello (496525)
Nicolas Nègre (16371)
Emmanuelle d’Alençon (718796)

November 2018

Excel file S4. List of gene target predictions of known differentially expressed miRs. (XLSX 1578 kb

Additional file 4 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 4: Supplementary Figure 2. MA-plots showing the relative expression of known or nove...

Additional file 13 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 13: Supplementary Excel Table S8. List of DE target genes (FDR < 0.05) of known miRs...

Additional file 3 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 3: Supplementary Figure 1. Base composition of known or novel mature miRNAs using we...

Additional file 14 of Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez (19584)
Imène Seninet (5940569)
Marion Orsucci (3201441)
Philippe Audiot (75413)
Nicolas Nègre (16371)
Kiwoong Nam (166772)
Réjane Streiff (140007)
Emmanuelle d’Alençon (718796)

August 2021

Additional file 14: Supplementary Excel Table S9. Summary of DE miR gene targets shared between Ostr...

Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Moné, Yves
Nhim, Sandra
Gimenez, Sylvie
Legeai, Fabrice
Seninet, Imène
Parrinello, Hugues
NEGRE, Nicolas

January 2018

Background: A change in the environment may impair development or survival of living organisms leadi...

Additional file 3: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Abstract

Extracted data

Additional file 3: of Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Abstract

Extracted data

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