Additional file 6: of Whole genome sequencing of Trypanosoma cruzi field isolates reveals extensive genomic variability and complex aneuploidy patterns within TcII DTU

Table S4. Ploidy estimations and statistic validation of all 41 chromosomes of the seven TcII field isolates, S11, S15, S154a, S162a, S23b, S44a and S92a. The mean, median and standard deviation of the predicted ploidy of each chromosome of each strain, based on the coverage of all genes in a given chromosome is shown. The evaluation if the predicted ploidy of each chromosome was lower than 1; 1.5 or higher than 2; 2.5; 3; 3.5; 4; 4.5 or 5 was performed based on Mann-Whitney-Wilcoxon tests, with one-way analysis of variance and a significance of p < 0.05, using R. Significant values are highlighted in red. (XLSX 46 kb