The predicted transcription factor motifs containing rs2072872 and rs6509.
- Varalee Yodsurang (6090737)
- Yaqi Tang (6090740)
- Yukie Takahashi (2642602)
- Chizu Tanikawa (135026)
- Yoichiro Kamatani (140517)
- Atsushi Takahashi (128295)
- Yukihide Momozawa (356235)
- Nobuo Fuse (287793)
- Junichi Sugawara (625364)
- Atsushi Shimizu (1862)
- Akimune Fukushima (4247959)
- Asahi Hishida (6090743)
- Norihiro Furusyo (6090746)
- Mariko Naito (22970)
- Kenji Wakai (174009)
- Taiki Yamaji (625213)
- Norie Sawada (573813)
- Motoki Iwasaki (181395)
- Shoichiro Tsugane (181450)
- Makoto Hirata (1376)
- Yoshinori Murakami (519971)
- Michiaki Kubo (128298)
- Koichi Matsuda (135032)
Publication date
December 2018
DOI Publisher
Public Library of Science (PLoS)Abstract
The SNP with flanking sequences (SNP ± 25 nucleotides) was searched for transcription factor binding site motifs using HOCOMOCO-11 collection (http://opera.autosome.ru) with a p-value cutoff = 0.0005 and fold-change cutoff = 4.0. The motifs built from ChIP-Seq data with quality A demonstrating high affinity (indicated by fold-change of G/A) for G allele are included. The SNP position is labeled in red.</p
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