<p>Predicted transcription factor binding site searches were performed using five programs: TRANSFAC, PROMO, MatInspector, TFSearch, and JASPAR. The SNP is shown in boldface within the predicted binding sequence. Core binding sequence shown in capital letters for TRANSFAC and MatInspector generated sequences. The scores represent matrix sequence similarity for each program. A minimum threshold of 85.0 was used for each program, and lowered to 75.0 for allelic comparison if necessary.</p
Background—The computational identification of functional transcription factor binding sites (TFBSs)...
P-Match is a new tool for identifying transcription factor (TF) binding sites in DNA sequences. It c...
<p>The 653bp construct includes -613C>T, -549T>C, -441C>T and -197T>C polymorphic sites.</p
<p>Predicted transcription factor binding site searches were performed using five programs: TRANSFAC...
BackgroundTranscription factor (TF) regulates the transcription of DNA to messenger RNA by binding t...
<p>The potential transcription factor binding sites were analyzed <i>in silico</i> with the program ...
<p>Binding scores differing more than 5 points between major and minor alleles are depicted in <b>bo...
<p>Note:</p>#<p>Nucleotides in the genomic sequences according with the consensus sequences are <u>u...
The SNP with flanking sequences (SNP ± 25 nucleotides) was searched for transcription factor binding...
In the presented work we search for transcription factor binding sites (BS) by including additional ...
Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify re...
The ability to determine the location and relative strength of all transcription-factor binding site...
AbstractWe compared positional weight matrix-based prediction methods for transcription factor (TF) ...
Transcription factor binding sites (TFBSs) are DNA sequences of 6 to 15 base pairs and interaction w...
The ability to determine the location and relative strength of all transcription-factor binding site...
Background—The computational identification of functional transcription factor binding sites (TFBSs)...
P-Match is a new tool for identifying transcription factor (TF) binding sites in DNA sequences. It c...
<p>The 653bp construct includes -613C>T, -549T>C, -441C>T and -197T>C polymorphic sites.</p
<p>Predicted transcription factor binding site searches were performed using five programs: TRANSFAC...
BackgroundTranscription factor (TF) regulates the transcription of DNA to messenger RNA by binding t...
<p>The potential transcription factor binding sites were analyzed <i>in silico</i> with the program ...
<p>Binding scores differing more than 5 points between major and minor alleles are depicted in <b>bo...
<p>Note:</p>#<p>Nucleotides in the genomic sequences according with the consensus sequences are <u>u...
The SNP with flanking sequences (SNP ± 25 nucleotides) was searched for transcription factor binding...
In the presented work we search for transcription factor binding sites (BS) by including additional ...
Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify re...
The ability to determine the location and relative strength of all transcription-factor binding site...
AbstractWe compared positional weight matrix-based prediction methods for transcription factor (TF) ...
Transcription factor binding sites (TFBSs) are DNA sequences of 6 to 15 base pairs and interaction w...
The ability to determine the location and relative strength of all transcription-factor binding site...
Background—The computational identification of functional transcription factor binding sites (TFBSs)...
P-Match is a new tool for identifying transcription factor (TF) binding sites in DNA sequences. It c...
<p>The 653bp construct includes -613C>T, -549T>C, -441C>T and -197T>C polymorphic sites.</p