Additional file 5: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

RESEARCH ARTICLE Evolution and Phylogenetic Diversity of Yam Species (Dioscorea spp.): Implication for Conservation and Agricultural Practices

Marie Florence S
Rine Ngo Ngwe
Denis Ndoumou Omokolo
Simon Joly

August 2016

Yams (Dioscorea spp.) consist of approximately 600 species. Presently, these species are threatened ...

A reference high-density genetic map of greater yam (Dioscorea alata L.)

Cormier, Fabien
Lawac, Floriane
Maledon, Erick
Gravillon, Marie-Claire
Nudol, Elie
Mournet, Pierre
Vignes, Hélène
Chair, Nana
Arnau, Gemma

January 2019

International audienceKey message This study generated the first high-density genetic map for D. ala...

Understanding the genetic diversity and population structure of Yam (Dioscorea alata L.) using microsatellite markers

Penet, Laurent

January 2017

Yams (Dioscorea sp.) are staple food crops for millions of people in tropical and subtropical region...

Additional file 6: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S4. Maximum likelihood tree of the inferred gene flow within D. dumetorum species with no gen...

Additional file 1: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S1. Phylogenetic relationships within D. dumetorum based on multilocus concatenated SNP seque...

Additional file 3: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S3. STRUCTURE plot of 44 accessions of D. dumetorum with Kâ=â2, 3, 5 clusters based on 64...

Additional file 2: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S2. Estimates of the model evidence for Kâ=â2:5 using TI estimator a) log-evidence and b)...

Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu
Eike Mayland-Quellhorst
Dirk C. Albach

December 2018

Abstract Background Yams (Dioscorea spp.) are economically important food for millions of people in ...

Additional file 1: of Molecular basis of African yam domestication: analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes

Roland Akakpo (4511170)
Nora Scarcelli (219573)
Hana Chaïr (3323121)
Alexandre Dansi (4511167)
Gustave Djedatin (4511164)
Anne-Céline Thuillet (222194)
Bénédicte Rhoné (3192054)
Olivier François (39338)
Karine Alix (68916)
Yves Vigouroux (219609)

October 2017

We assess if the mapping of genomic DNA reads on a transcriptome reference could impact SNP calling ...

Additional file 5: Supplemental dataset S3. of Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Muluneh Tamiru (432601)
Satoshi Natsume (432603)
Hiroki Takagi (432600)
Benjamen White (4447021)
Hiroki Yaegashi (432604)
Motoki Shimizu (3418073)
Kentaro Yoshida (165749)
Aiko Uemura (432609)
Kaori Oikawa (4447015)
Akira Abe (432602)
Naoya Urasaki (151017)
Hideo Matsumura (151047)
Pachakkil Babil (4447024)
Shinsuke Yamanaka (3368720)
Ryo Matsumoto (527418)
Satoru Muranaka (439782)
Gezahegn Girma (3486440)
Antonio Lopez-Montes (4447030)
Melaku Gedil (3486449)
Ranjana Bhattacharjee (776605)
Michael Abberton (4447027)
P. Kumar (16689)
Ismail Rabbi (3486452)
Mai Tsujimura (3450446)
Toru Terachi (60364)
Wilfried Haerty (3539540)
Manuel Corpas (376987)
Sophien Kamoun (6132)
GĂźnter Kahl (4447072)
Hiroko Takagi (4447018)
Robert Asiedu (776606)
Ryohei Terauchi (165768)

September 2017

Functional annotation of D. rotundata genes conserved between D. rotundata and at least one other an...

Genetic and phenotypic diversity in a germplasm working collection of cultivated tropical yams (Dioscorea spp.)

Sartie, A.M.
Asiedu, Robert
Franco, J.

October 2016

Published Online: 7 February, 2012A working collection of yam (Dioscoreaspp.) comprising 53 landrace...

Additional file 1: Tables S1âS20. of Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Muluneh Tamiru (432601)
Satoshi Natsume (432603)
Hiroki Takagi (432600)
Benjamen White (4447021)
Hiroki Yaegashi (432604)
Motoki Shimizu (3418073)
Kentaro Yoshida (165749)
Aiko Uemura (432609)
Kaori Oikawa (4447015)
Akira Abe (432602)
Naoya Urasaki (151017)
Hideo Matsumura (151047)
Pachakkil Babil (4447024)
Shinsuke Yamanaka (3368720)
Ryo Matsumoto (527418)
Satoru Muranaka (439782)
Gezahegn Girma (3486440)
Antonio Lopez-Montes (4447030)
Melaku Gedil (3486449)
Ranjana Bhattacharjee (776605)
Michael Abberton (4447027)
P. Kumar (16689)
Ismail Rabbi (3486452)
Mai Tsujimura (3450446)
Toru Terachi (60364)
Wilfried Haerty (3539540)
Manuel Corpas (376987)
Sophien Kamoun (6132)
GĂźnter Kahl (4447072)
Hiroko Takagi (4447018)
Robert Asiedu (776606)
Ryohei Terauchi (165768)

September 2017

Supplementary data including world yam production statistics [94] (Table S1), summary of genome sequ...

RESEARCH ARTICLE Spatially structured genetic diversity of the Amerindian yam (Dioscorea trifida L.) assessed by SSR and ISSR markers in Southern Brazil

Samantha Koehler
Paul Gepts
Elizabeth A. Veasey

January 2013

among the economically most important cultivated Amerindian yam species, whose origin and domesti-ca...

Additional file 4: Supplemental dataset S2. of Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Muluneh Tamiru (432601)
Satoshi Natsume (432603)
Hiroki Takagi (432600)
Benjamen White (4447021)
Hiroki Yaegashi (432604)
Motoki Shimizu (3418073)
Kentaro Yoshida (165749)
Aiko Uemura (432609)
Kaori Oikawa (4447015)
Akira Abe (432602)
Naoya Urasaki (151017)
Hideo Matsumura (151047)
Pachakkil Babil (4447024)
Shinsuke Yamanaka (3368720)
Ryo Matsumoto (527418)
Satoru Muranaka (439782)
Gezahegn Girma (3486440)
Antonio Lopez-Montes (4447030)
Melaku Gedil (3486449)
Ranjana Bhattacharjee (776605)
Michael Abberton (4447027)
P. Kumar (16689)
Ismail Rabbi (3486452)
Mai Tsujimura (3450446)
Toru Terachi (60364)
Wilfried Haerty (3539540)
Manuel Corpas (376987)
Sophien Kamoun (6132)
GĂźnter Kahl (4447072)
Hiroko Takagi (4447018)
Robert Asiedu (776606)
Ryohei Terauchi (165768)

September 2017

Gene orthology between four angiosperms showing presence, absence, and duplication between species. ...

Genetic variability in yam cultivars from Guinea-Sudan of Benin assessed by random amplified polymorphic DNA

Zannou, A.
Agbicodo, E.
Zoundjihékpon, J.
Struik, P.C.
Ahanchédé, A.
Kossou, D.K.
Sanni, A.

January 2009

Yam (Dioscorea spp.) is an important food and cash crop in the Guinea-Sudan zone of Benin. The genet...

RESEARCH ARTICLE Evolution and Phylogenetic Diversity of Yam Species (Dioscorea spp.): Implication for Conservation and Agricultural Practices

Marie Florence S
Rine Ngo Ngwe
Denis Ndoumou Omokolo
Simon Joly

August 2016

Yams (Dioscorea spp.) consist of approximately 600 species. Presently, these species are threatened ...

A reference high-density genetic map of greater yam (Dioscorea alata L.)

Cormier, Fabien
Lawac, Floriane
Maledon, Erick
Gravillon, Marie-Claire
Nudol, Elie
Mournet, Pierre
Vignes, Hélène
Chair, Nana
Arnau, Gemma

January 2019

International audienceKey message This study generated the first high-density genetic map for D. ala...

Understanding the genetic diversity and population structure of Yam (Dioscorea alata L.) using microsatellite markers

Penet, Laurent

January 2017

Yams (Dioscorea sp.) are staple food crops for millions of people in tropical and subtropical region...

Additional file 6: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S4. Maximum likelihood tree of the inferred gene flow within D. dumetorum species with no gen...

Additional file 1: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S1. Phylogenetic relationships within D. dumetorum based on multilocus concatenated SNP seque...

Additional file 3: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S3. STRUCTURE plot of 44 accessions of D. dumetorum with Kâ=â2, 3, 5 clusters based on 64...

Additional file 2: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu (6100808)
Eike Mayland-Quellhorst (3292008)
Dirk Albach (2611903)

December 2018

Figure S2. Estimates of the model evidence for Kâ=â2:5 using TI estimator a) log-evidence and b)...

Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Christian Siadjeu
Eike Mayland-Quellhorst
Dirk C. Albach

December 2018

Abstract Background Yams (Dioscorea spp.) are economically important food for millions of people in ...

Additional file 1: of Molecular basis of African yam domestication: analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes

Roland Akakpo (4511170)
Nora Scarcelli (219573)
Hana Chaïr (3323121)
Alexandre Dansi (4511167)
Gustave Djedatin (4511164)
Anne-Céline Thuillet (222194)
Bénédicte Rhoné (3192054)
Olivier François (39338)
Karine Alix (68916)
Yves Vigouroux (219609)

October 2017

We assess if the mapping of genomic DNA reads on a transcriptome reference could impact SNP calling ...

Additional file 5: Supplemental dataset S3. of Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Muluneh Tamiru (432601)
Satoshi Natsume (432603)
Hiroki Takagi (432600)
Benjamen White (4447021)
Hiroki Yaegashi (432604)
Motoki Shimizu (3418073)
Kentaro Yoshida (165749)
Aiko Uemura (432609)
Kaori Oikawa (4447015)
Akira Abe (432602)
Naoya Urasaki (151017)
Hideo Matsumura (151047)
Pachakkil Babil (4447024)
Shinsuke Yamanaka (3368720)
Ryo Matsumoto (527418)
Satoru Muranaka (439782)
Gezahegn Girma (3486440)
Antonio Lopez-Montes (4447030)
Melaku Gedil (3486449)
Ranjana Bhattacharjee (776605)
Michael Abberton (4447027)
P. Kumar (16689)
Ismail Rabbi (3486452)
Mai Tsujimura (3450446)
Toru Terachi (60364)
Wilfried Haerty (3539540)
Manuel Corpas (376987)
Sophien Kamoun (6132)
GĂźnter Kahl (4447072)
Hiroko Takagi (4447018)
Robert Asiedu (776606)
Ryohei Terauchi (165768)

September 2017

Functional annotation of D. rotundata genes conserved between D. rotundata and at least one other an...

Genetic and phenotypic diversity in a germplasm working collection of cultivated tropical yams (Dioscorea spp.)

Sartie, A.M.
Asiedu, Robert
Franco, J.

October 2016

Published Online: 7 February, 2012A working collection of yam (Dioscoreaspp.) comprising 53 landrace...

Additional file 1: Tables S1âS20. of Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Muluneh Tamiru (432601)
Satoshi Natsume (432603)
Hiroki Takagi (432600)
Benjamen White (4447021)
Hiroki Yaegashi (432604)
Motoki Shimizu (3418073)
Kentaro Yoshida (165749)
Aiko Uemura (432609)
Kaori Oikawa (4447015)
Akira Abe (432602)
Naoya Urasaki (151017)
Hideo Matsumura (151047)
Pachakkil Babil (4447024)
Shinsuke Yamanaka (3368720)
Ryo Matsumoto (527418)
Satoru Muranaka (439782)
Gezahegn Girma (3486440)
Antonio Lopez-Montes (4447030)
Melaku Gedil (3486449)
Ranjana Bhattacharjee (776605)
Michael Abberton (4447027)
P. Kumar (16689)
Ismail Rabbi (3486452)
Mai Tsujimura (3450446)
Toru Terachi (60364)
Wilfried Haerty (3539540)
Manuel Corpas (376987)
Sophien Kamoun (6132)
GĂźnter Kahl (4447072)
Hiroko Takagi (4447018)
Robert Asiedu (776606)
Ryohei Terauchi (165768)

September 2017

Supplementary data including world yam production statistics [94] (Table S1), summary of genome sequ...

RESEARCH ARTICLE Spatially structured genetic diversity of the Amerindian yam (Dioscorea trifida L.) assessed by SSR and ISSR markers in Southern Brazil

Samantha Koehler
Paul Gepts
Elizabeth A. Veasey

January 2013

among the economically most important cultivated Amerindian yam species, whose origin and domesti-ca...

Additional file 4: Supplemental dataset S2. of Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Muluneh Tamiru (432601)
Satoshi Natsume (432603)
Hiroki Takagi (432600)
Benjamen White (4447021)
Hiroki Yaegashi (432604)
Motoki Shimizu (3418073)
Kentaro Yoshida (165749)
Aiko Uemura (432609)
Kaori Oikawa (4447015)
Akira Abe (432602)
Naoya Urasaki (151017)
Hideo Matsumura (151047)
Pachakkil Babil (4447024)
Shinsuke Yamanaka (3368720)
Ryo Matsumoto (527418)
Satoru Muranaka (439782)
Gezahegn Girma (3486440)
Antonio Lopez-Montes (4447030)
Melaku Gedil (3486449)
Ranjana Bhattacharjee (776605)
Michael Abberton (4447027)
P. Kumar (16689)
Ismail Rabbi (3486452)
Mai Tsujimura (3450446)
Toru Terachi (60364)
Wilfried Haerty (3539540)
Manuel Corpas (376987)
Sophien Kamoun (6132)
GĂźnter Kahl (4447072)
Hiroko Takagi (4447018)
Robert Asiedu (776606)
Ryohei Terauchi (165768)

September 2017

Gene orthology between four angiosperms showing presence, absence, and duplication between species. ...

Genetic variability in yam cultivars from Guinea-Sudan of Benin assessed by random amplified polymorphic DNA

Zannou, A.
Agbicodo, E.
Zoundjihékpon, J.
Struik, P.C.
Ahanchédé, A.
Kossou, D.K.
Sanni, A.

January 2009

Yam (Dioscorea spp.) is an important food and cash crop in the Guinea-Sudan zone of Benin. The genet...

RESEARCH ARTICLE Evolution and Phylogenetic Diversity of Yam Species (Dioscorea spp.): Implication for Conservation and Agricultural Practices

Marie Florence S
Rine Ngo Ngwe
Denis Ndoumou Omokolo
Simon Joly

August 2016

Yams (Dioscorea spp.) consist of approximately 600 species. Presently, these species are threatened ...

A reference high-density genetic map of greater yam (Dioscorea alata L.)

Cormier, Fabien
Lawac, Floriane
Maledon, Erick
Gravillon, Marie-Claire
Nudol, Elie
Mournet, Pierre
Vignes, Hélène
Chair, Nana
Arnau, Gemma

January 2019

International audienceKey message This study generated the first high-density genetic map for D. ala...

Understanding the genetic diversity and population structure of Yam (Dioscorea alata L.) using microsatellite markers

Penet, Laurent

January 2017

Yams (Dioscorea sp.) are staple food crops for millions of people in tropical and subtropical region...

Additional file 5: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Abstract

Extracted data

Additional file 5: of Genetic diversity and population structure of trifoliate yam (Dioscorea dumetorum Kunth) in Cameroon revealed by genotyping-by-sequencing (GBS)

Abstract

Extracted data

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