Additional file 1: of Impact of Mycobacterium tuberculosis complex lineages as a determinant of disease phenotypes from an immigrant rich moderate tuberculosis burden country

Additional file 2: of Characterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmission

Yi Liu (36759)
Xuxia Zhang (631797)
Yuqing Zhang (32031)
Yong Sun (406434)
Cong Yao (441931)
Wei Wang (17594)
Chuanyou Li (115342)

December 2018

Table S1. Spoligotyping patterns result of M.tb strains collected from Beijing in this study. (DOCX ...

Additional file 1: of Characterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmission

Yi Liu (36759)
Xuxia Zhang (631797)
Yuqing Zhang (32031)
Yong Sun (406434)
Cong Yao (441931)
Wei Wang (17594)
Chuanyou Li (115342)

December 2018

Table S2. The Hunter-Gaston discriminatory index of the 12 VNTR loci in M.tb strains from Beijing. (...

Additional file 1: of Evaluation of “international transfer-out” among foreign-born pulmonary tuberculosis patients in Japan – what are the implications for a cross-border patient referral system?

Lisa Kawatsu (4559839)
Akihiro Ohkado (797568)
Kazuhiro Uchimura (797569)
Kiyohiko Izumi (797567)

December 2018

Trend in the number and proportion of international transfer-out, 2011–2015. A table showing the num...

Additional file 2: of Impact of Mycobacterium tuberculosis complex lineages as a determinant of disease phenotypes from an immigrant rich moderate tuberculosis burden country

Bright Varghese (279027)
Mushira Enani (3632839)
Abdulrahman Alrajhi (2697154)
Sameera Al Johani (6158270)
Ali Albarak (6158273)
Sahar Althawadi (2697157)
Noura Elkhizzi (6158276)
Hawra AlGhafli (6158279)
Mohammed Shoukri (279028)
Sahal Al - Hajoj (6158282)

December 2018

Nationality of the patient and distribution of lineages. The figure shows the distribution of major ...

Additional file 3: of Impact of Mycobacterium tuberculosis complex lineages as a determinant of disease phenotypes from an immigrant rich moderate tuberculosis burden country

Bright Varghese (279027)
Mushira Enani (3632839)
Abdulrahman Alrajhi (2697154)
Sameera Al Johani (6158270)
Ali Albarak (6158273)
Sahar Althawadi (2697157)
Noura Elkhizzi (6158276)
Hawra AlGhafli (6158279)
Mohammed Shoukri (279028)
Sahal Al - Hajoj (6158282)

December 2018

Statistical association of major MTBC lineages and extrapulmonary site of infections. (PDF 112 kb

Additional file 1: of Migration and tuberculosis transmission in a middle-income country: a cross-sectional study in a central area of São Paulo, Brazil

Julia Pescarini (5152922)
Vera Simonsen (5152925)
Lucilaine Ferrazoli (90810)
Laura Rodrigues (3400508)
Rosangela Oliveira (5152919)
Eliseu Waldman (3542462)
Rein Houben (5091068)

April 2018

Supplement Table S1 describe the cases of TB among Brazilians and South American migrants in the stu...

Additional file 2: Table S2. of Race and nativity are major determinants of tuberculosis in the U.S.: evidence of health disparities in tuberculosis incidence in Michigan, 2004â2012

Grace Noppert (4066201)
Mark Wilson (734683)
Philippa Clarke (4049026)
Wen Ye (533818)
Peter Davidson (78398)
Zhenhua Yang (150675)

June 2017

Incidence Rate Ratio of TB According to Selected Socio-Demographic Characteristics in Michigan, 2004...

Additional file 2: of New epidemic cluster of pre-extensively drug resistant isolates of Mycobacterium tuberculosis Ural family emerging in Eastern Europe

Viacheslav Sinkov (5880692)
Oleg Ogarkov (4033247)
Igor Mokrousov (62801)
Yuri Bukin (5880695)
Svetlana Zhdanova (5880698)
Scott Heysell (3639796)

October 2018

Figure S1. ML consensus phylogenetic tree of 149Â M. tuberculosis Ural family and one CAS genomes ba...

Additional file 1: of New epidemic cluster of pre-extensively drug resistant isolates of Mycobacterium tuberculosis Ural family emerging in Eastern Europe

Viacheslav Sinkov (5880692)
Oleg Ogarkov (4033247)
Igor Mokrousov (62801)
Yuri Bukin (5880695)
Svetlana Zhdanova (5880698)
Scott Heysell (3639796)

October 2018

Table S1. Information on 149Â M. tuberculosis Ural strains included in this study. Strain ID, drug s...

Additional file 1: of Predominance of Uganda genotype of Mycobacterium tuberculosis isolated from Ugandan patients with tuberculous lymphadenitis

Dan Wamala (3451703)
Moses Okee (133435)
Edgar Kigozi (724127)
David Couvin (130640)
Nalin Rastogi (674)
Moses Joloba (230166)
Gunilla Kallenius (73925)

September 2015

Table S1. A summary of genotyping, demographic and epidemiologic data on 121 M. tuberculosis strains...

Additional file 2: of First insights on the genetic diversity of MDR Mycobacterium tuberculosis in Lebanon

Balig Panossian (6164099)
Tamara Salloum (3917417)
George Araj (5059463)
Georges Khazen (171939)
Sima Tokajian (3559616)

December 2018

List of M. tuberculosis strains used in this study. Lineages/Sublineages generated using TGS-TB and ...

Additional file 1: of In vivo evolution of drug-resistant Mycobacterium tuberculosis in patients during long-term treatment

Yuhui Xu (525146)
Fei Liu (21082)
Suting Chen (486143)
Jiannan Wu (776349)
Yongfei Hu (256131)
Baoli Zhu (43136)
Zhaogang Sun (525143)

August 2018

Table S1. Sequencing statistics of the 18Â M. tuberculosis isolates. Note: A, B, C, and D indicate t...

Additional file 1 of Genetic composition and evolution of the prevalent Mycobacterium tuberculosis lineages 2 and 4 in the Chinese and Zhejiang Province populations

Beibei Wu (369317)
Wenlong Zhu (9740233)
Yue Wang (65477)
Qi Wang (22418)
Lin Zhou (141050)
Zhengwei Liu (3452954)
Lijun Bi (121470)
Mathema Barun (11310345)
Barry N. Kreiswirth (7286546)
Liang Chen (73736)
Songhua Chen (537072)
Xiaomeng Wang (348745)
Weibing Wang (11310348)

August 2021

Additional file 1: Table S1. The detail information (run accession, year of collection and demograph...

Additional file 1: of The within-host population dynamics of Mycobacterium tuberculosis vary with treatment efficacy

Andrej Trauner (230781)
Qingyun Liu (322730)
Laura Via (3935795)
Xin Liu (43569)
Xianglin Ruan (3935804)
Lili Liang (2862176)
Huimin Shi (561572)
Ying Chen (9697)
Ziling Wang (3935792)
Ruixia Liang (3935801)
Wei Zhang (405)
Wang Wei (2074669)
Jingcai Gao (3935798)
Gang Sun (80623)
Daniela Brites (192428)
Kathleen England (2385313)
Guolong Zhang (298643)
Sebastien Gagneux (149824)
Clifton Barry (3935807)
Qian Gao (146991)

April 2017

Supplementary text, figures and tables. In this document we elaborate on the efficacy of treatment (...

Additional file 1: of Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007â11

Emilia Vynnycky (565037)
Adrienne Keen (2914673)
Jason Evans (599560)
Shaina Khanom (6182183)
Peter Hawkey (3468629)
Richard White (138360)
Ibrahim Abubakar (217017)

January 2019

This contains the results of the sensitivity of the retrospective clustering analyses to the size of...

Additional file 2: of Characterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmission

Yi Liu (36759)
Xuxia Zhang (631797)
Yuqing Zhang (32031)
Yong Sun (406434)
Cong Yao (441931)
Wei Wang (17594)
Chuanyou Li (115342)

December 2018

Table S1. Spoligotyping patterns result of M.tb strains collected from Beijing in this study. (DOCX ...

Additional file 1: of Characterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmission

Yi Liu (36759)
Xuxia Zhang (631797)
Yuqing Zhang (32031)
Yong Sun (406434)
Cong Yao (441931)
Wei Wang (17594)
Chuanyou Li (115342)

December 2018

Table S2. The Hunter-Gaston discriminatory index of the 12 VNTR loci in M.tb strains from Beijing. (...

Additional file 1: of Evaluation of “international transfer-out” among foreign-born pulmonary tuberculosis patients in Japan – what are the implications for a cross-border patient referral system?

Lisa Kawatsu (4559839)
Akihiro Ohkado (797568)
Kazuhiro Uchimura (797569)
Kiyohiko Izumi (797567)

December 2018

Trend in the number and proportion of international transfer-out, 2011–2015. A table showing the num...

Additional file 2: of Impact of Mycobacterium tuberculosis complex lineages as a determinant of disease phenotypes from an immigrant rich moderate tuberculosis burden country

Bright Varghese (279027)
Mushira Enani (3632839)
Abdulrahman Alrajhi (2697154)
Sameera Al Johani (6158270)
Ali Albarak (6158273)
Sahar Althawadi (2697157)
Noura Elkhizzi (6158276)
Hawra AlGhafli (6158279)
Mohammed Shoukri (279028)
Sahal Al - Hajoj (6158282)

December 2018

Nationality of the patient and distribution of lineages. The figure shows the distribution of major ...

Additional file 3: of Impact of Mycobacterium tuberculosis complex lineages as a determinant of disease phenotypes from an immigrant rich moderate tuberculosis burden country

Bright Varghese (279027)
Mushira Enani (3632839)
Abdulrahman Alrajhi (2697154)
Sameera Al Johani (6158270)
Ali Albarak (6158273)
Sahar Althawadi (2697157)
Noura Elkhizzi (6158276)
Hawra AlGhafli (6158279)
Mohammed Shoukri (279028)
Sahal Al - Hajoj (6158282)

December 2018

Statistical association of major MTBC lineages and extrapulmonary site of infections. (PDF 112 kb

Additional file 1: of Migration and tuberculosis transmission in a middle-income country: a cross-sectional study in a central area of São Paulo, Brazil

Julia Pescarini (5152922)
Vera Simonsen (5152925)
Lucilaine Ferrazoli (90810)
Laura Rodrigues (3400508)
Rosangela Oliveira (5152919)
Eliseu Waldman (3542462)
Rein Houben (5091068)

April 2018

Supplement Table S1 describe the cases of TB among Brazilians and South American migrants in the stu...

Additional file 2: Table S2. of Race and nativity are major determinants of tuberculosis in the U.S.: evidence of health disparities in tuberculosis incidence in Michigan, 2004â2012

Grace Noppert (4066201)
Mark Wilson (734683)
Philippa Clarke (4049026)
Wen Ye (533818)
Peter Davidson (78398)
Zhenhua Yang (150675)

June 2017

Incidence Rate Ratio of TB According to Selected Socio-Demographic Characteristics in Michigan, 2004...

Additional file 2: of New epidemic cluster of pre-extensively drug resistant isolates of Mycobacterium tuberculosis Ural family emerging in Eastern Europe

Viacheslav Sinkov (5880692)
Oleg Ogarkov (4033247)
Igor Mokrousov (62801)
Yuri Bukin (5880695)
Svetlana Zhdanova (5880698)
Scott Heysell (3639796)

October 2018

Figure S1. ML consensus phylogenetic tree of 149Â M. tuberculosis Ural family and one CAS genomes ba...

Additional file 1: of New epidemic cluster of pre-extensively drug resistant isolates of Mycobacterium tuberculosis Ural family emerging in Eastern Europe

Viacheslav Sinkov (5880692)
Oleg Ogarkov (4033247)
Igor Mokrousov (62801)
Yuri Bukin (5880695)
Svetlana Zhdanova (5880698)
Scott Heysell (3639796)

October 2018

Table S1. Information on 149Â M. tuberculosis Ural strains included in this study. Strain ID, drug s...

Additional file 1: of Predominance of Uganda genotype of Mycobacterium tuberculosis isolated from Ugandan patients with tuberculous lymphadenitis

Dan Wamala (3451703)
Moses Okee (133435)
Edgar Kigozi (724127)
David Couvin (130640)
Nalin Rastogi (674)
Moses Joloba (230166)
Gunilla Kallenius (73925)

September 2015

Table S1. A summary of genotyping, demographic and epidemiologic data on 121 M. tuberculosis strains...

Additional file 2: of First insights on the genetic diversity of MDR Mycobacterium tuberculosis in Lebanon

Balig Panossian (6164099)
Tamara Salloum (3917417)
George Araj (5059463)
Georges Khazen (171939)
Sima Tokajian (3559616)

December 2018

List of M. tuberculosis strains used in this study. Lineages/Sublineages generated using TGS-TB and ...

Additional file 1: of In vivo evolution of drug-resistant Mycobacterium tuberculosis in patients during long-term treatment

Yuhui Xu (525146)
Fei Liu (21082)
Suting Chen (486143)
Jiannan Wu (776349)
Yongfei Hu (256131)
Baoli Zhu (43136)
Zhaogang Sun (525143)

August 2018

Table S1. Sequencing statistics of the 18Â M. tuberculosis isolates. Note: A, B, C, and D indicate t...

Additional file 1 of Genetic composition and evolution of the prevalent Mycobacterium tuberculosis lineages 2 and 4 in the Chinese and Zhejiang Province populations

Beibei Wu (369317)
Wenlong Zhu (9740233)
Yue Wang (65477)
Qi Wang (22418)
Lin Zhou (141050)
Zhengwei Liu (3452954)
Lijun Bi (121470)
Mathema Barun (11310345)
Barry N. Kreiswirth (7286546)
Liang Chen (73736)
Songhua Chen (537072)
Xiaomeng Wang (348745)
Weibing Wang (11310348)

August 2021

Additional file 1: Table S1. The detail information (run accession, year of collection and demograph...

Additional file 1: of The within-host population dynamics of Mycobacterium tuberculosis vary with treatment efficacy

Andrej Trauner (230781)
Qingyun Liu (322730)
Laura Via (3935795)
Xin Liu (43569)
Xianglin Ruan (3935804)
Lili Liang (2862176)
Huimin Shi (561572)
Ying Chen (9697)
Ziling Wang (3935792)
Ruixia Liang (3935801)
Wei Zhang (405)
Wang Wei (2074669)
Jingcai Gao (3935798)
Gang Sun (80623)
Daniela Brites (192428)
Kathleen England (2385313)
Guolong Zhang (298643)
Sebastien Gagneux (149824)
Clifton Barry (3935807)
Qian Gao (146991)

April 2017

Supplementary text, figures and tables. In this document we elaborate on the efficacy of treatment (...

Additional file 1: of Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007â11

Emilia Vynnycky (565037)
Adrienne Keen (2914673)
Jason Evans (599560)
Shaina Khanom (6182183)
Peter Hawkey (3468629)
Richard White (138360)
Ibrahim Abubakar (217017)

January 2019

This contains the results of the sensitivity of the retrospective clustering analyses to the size of...

Additional file 2: of Characterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmission

Yi Liu (36759)
Xuxia Zhang (631797)
Yuqing Zhang (32031)
Yong Sun (406434)
Cong Yao (441931)
Wei Wang (17594)
Chuanyou Li (115342)

December 2018

Table S1. Spoligotyping patterns result of M.tb strains collected from Beijing in this study. (DOCX ...

Additional file 1: of Characterization of Mycobacterium tuberculosis strains in Beijing, China: drug susceptibility phenotypes and Beijing genotype family transmission

Yi Liu (36759)
Xuxia Zhang (631797)
Yuqing Zhang (32031)
Yong Sun (406434)
Cong Yao (441931)
Wei Wang (17594)
Chuanyou Li (115342)

December 2018

Table S2. The Hunter-Gaston discriminatory index of the 12 VNTR loci in M.tb strains from Beijing. (...

Additional file 1: of Evaluation of “international transfer-out” among foreign-born pulmonary tuberculosis patients in Japan – what are the implications for a cross-border patient referral system?

Lisa Kawatsu (4559839)
Akihiro Ohkado (797568)
Kazuhiro Uchimura (797569)
Kiyohiko Izumi (797567)

December 2018

Trend in the number and proportion of international transfer-out, 2011–2015. A table showing the num...

Additional file 1: of Impact of Mycobacterium tuberculosis complex lineages as a determinant of disease phenotypes from an immigrant rich moderate tuberculosis burden country

Abstract

Extracted data

Additional file 1: of Impact of Mycobacterium tuberculosis complex lineages as a determinant of disease phenotypes from an immigrant rich moderate tuberculosis burden country

Abstract

Extracted data

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