For each species, each Boxplot includes 8 independent samples for each mock (two PCR cycle conditions and 2 replicates for sequencing run 1, one PCR cycle condition and 3 replicates for sequencing run 2, one PCR cycle condition and 1 replicate for sequencing run 3).</p
<p>Compared to the initial distribution of species in terms of cell number (first row) and biomass (...
<p>Number of reads, percentage observed and percentage expected for each of the five mock community ...
<p>(A) Relationship between DNA yield and percent of contaminating genera in the mock community. The...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p>Barplots of (A) the number of total reads (i.e. number of reads of F3- and F5-tagged paired reads...
<p>(a) Boxplot for total bacterial load. (b) Boxplots for the total loads of genera <i>Bifidobacteri...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p><b>(a)</b> Stacked bar charts showing the actual relative abundance of bacterial families in the ...
<p>Circles represent individual taxa, and the relationship between the log<sub>10</sub> of their abu...
A. Averaged evenly distributed mock community samples for the CutPrimers bioinformatics workflow str...
<p>The estimated abundances using qPCR and by mapping reads to reference genomes correlate with a Pe...
Set of 140 in silico microbial communities used to evaluate the performance of metagenomic classifie...
<p>Observed abundances are given as totals and as barcode-separated datasets. Expected abundances ha...
<p>Number of reads, percentage observed and percentage expected for each of the mock community sampl...
Genomic DNA from American Type Culture Collection (ATCC, Manassas, VA) for even (ATCC® MSA-1002) and...
<p>Compared to the initial distribution of species in terms of cell number (first row) and biomass (...
<p>Number of reads, percentage observed and percentage expected for each of the five mock community ...
<p>(A) Relationship between DNA yield and percent of contaminating genera in the mock community. The...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p>Barplots of (A) the number of total reads (i.e. number of reads of F3- and F5-tagged paired reads...
<p>(a) Boxplot for total bacterial load. (b) Boxplots for the total loads of genera <i>Bifidobacteri...
<p>A: mock1, B: mock 2, C: mock 3. Dashed line: theoretical relative abundance. The experimental mea...
<p><b>(a)</b> Stacked bar charts showing the actual relative abundance of bacterial families in the ...
<p>Circles represent individual taxa, and the relationship between the log<sub>10</sub> of their abu...
A. Averaged evenly distributed mock community samples for the CutPrimers bioinformatics workflow str...
<p>The estimated abundances using qPCR and by mapping reads to reference genomes correlate with a Pe...
Set of 140 in silico microbial communities used to evaluate the performance of metagenomic classifie...
<p>Observed abundances are given as totals and as barcode-separated datasets. Expected abundances ha...
<p>Number of reads, percentage observed and percentage expected for each of the mock community sampl...
Genomic DNA from American Type Culture Collection (ATCC, Manassas, VA) for even (ATCC® MSA-1002) and...
<p>Compared to the initial distribution of species in terms of cell number (first row) and biomass (...
<p>Number of reads, percentage observed and percentage expected for each of the five mock community ...
<p>(A) Relationship between DNA yield and percent of contaminating genera in the mock community. The...