Additional file 3: of Experimental validation of in silico predicted RAD locus frequencies using genomic resources and short read data from a model marine mammal

Summary information for the alignments of the RAD locus consensus sequences obtained from the seven de novo assemblies to the reference genome. For each tested combination of parameters, we report the number and percentage of mapped RAD loci, average mapping quality, the number of RAD loci mapped to left and right sides of restriction sites separately, the number of genomic locations with RAD loci mapped to both sides of restriction sites, the number of genomic locations with RAD loci mapped to only one side of restriction sites, the number of occurrences of scenarios I, II and III, and finally the estimated number of restriction enzyme cutting sites. (XLSX 11 kb