Additional file 6. Specificity of the xlnR+ response patterns on xylose, xylan and straw. Substrate–dependent scatter plots of log2 (FC) values in the xlnR+ strain as a function of log2 (FC) values in the wild type strain. The GOIs are gathered according to the five gene clusters that have been defined in Fig. 2
<p>mRNA expression changes (log<sub>2</sub> expression ratios relative to glucose) for all 92 CAZyme...
Additional file 3. Fig. S3 Enzyme activity analysis of wild-type, xlnR A871V and gpdA(p)::xlnR strai...
The study of biological networks has tremendously improved our understanding of complex bio-molecula...
Additional file 5. Specificity of the ΔxlnR response patterns on xylose, xylan and straw. Substrate-...
Additional file 3. GOIs expression data in each gene cluster. Box plot illustration of log2 (FC) val...
Additional file 2. Expression profiles in gene clusters, in the WT strain, as a function of culture ...
Additional file 4. GOIs expression data in each functional category. Box plot illustration of log2 (...
Additional file 7. Pairwise correlations between genes encoding backbone hydrolases, in the three st...
Additional file 8. Data file of expression data from the study. This xlsx file contains all calculat...
Background: Research on filamentous fungi emphasized the remarkable redundancy in genes encoding hyd...
Background: Transcription of genes coding for xylanolytic and cellulolytic enzymes in Aspergillus ni...
modeling and analytic assessment of the transcription dynamics of the XlnR regulon in Aspergillus ni...
The transcriptional activator XlnR (Xlr1/Xyr1) is a major regulator in fungal xylan and cellulose de...
The transcriptional activator XlnR (Xlr1/Xyr1) is a major regulator in fungal xylan and cellulose de...
Additional file 6: Table S5. SignalP annotated genes with bi-modal expression pattern. File with the...
<p>mRNA expression changes (log<sub>2</sub> expression ratios relative to glucose) for all 92 CAZyme...
Additional file 3. Fig. S3 Enzyme activity analysis of wild-type, xlnR A871V and gpdA(p)::xlnR strai...
The study of biological networks has tremendously improved our understanding of complex bio-molecula...
Additional file 5. Specificity of the ΔxlnR response patterns on xylose, xylan and straw. Substrate-...
Additional file 3. GOIs expression data in each gene cluster. Box plot illustration of log2 (FC) val...
Additional file 2. Expression profiles in gene clusters, in the WT strain, as a function of culture ...
Additional file 4. GOIs expression data in each functional category. Box plot illustration of log2 (...
Additional file 7. Pairwise correlations between genes encoding backbone hydrolases, in the three st...
Additional file 8. Data file of expression data from the study. This xlsx file contains all calculat...
Background: Research on filamentous fungi emphasized the remarkable redundancy in genes encoding hyd...
Background: Transcription of genes coding for xylanolytic and cellulolytic enzymes in Aspergillus ni...
modeling and analytic assessment of the transcription dynamics of the XlnR regulon in Aspergillus ni...
The transcriptional activator XlnR (Xlr1/Xyr1) is a major regulator in fungal xylan and cellulose de...
The transcriptional activator XlnR (Xlr1/Xyr1) is a major regulator in fungal xylan and cellulose de...
Additional file 6: Table S5. SignalP annotated genes with bi-modal expression pattern. File with the...
<p>mRNA expression changes (log<sub>2</sub> expression ratios relative to glucose) for all 92 CAZyme...
Additional file 3. Fig. S3 Enzyme activity analysis of wild-type, xlnR A871V and gpdA(p)::xlnR strai...
The study of biological networks has tremendously improved our understanding of complex bio-molecula...