Additional file 2: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Additional file 3: of Transcriptome profiling of two contrasting ornamental cabbage (Brassica oleracea var. acephala) lines provides insights into purple and white inner leaf pigmentation

Si-Won Jin (5940566)
Md Rahim (3777268)
Khandker Afrin (5940575)
Jong-In Park (121860)
Jong-Goo Kang (5940578)
Ill-Sup Nou (121873)

November 2018

Table S3. Transcription factor (TF) families identified in two ornamental cabbage lines. (XLSX 98 kb

Additional file 2: of Genome-wide analysis and stress-responsive expression of CCCH zinc finger family genes in Brassica rapa

Boyi Pi (6158561)
Xinghui He (6158564)
Ying Ruan (6158567)
Jyan-Chyun Jang (3179142)
Yong Huang (15745)

December 2018

CCCH duplicated genes of B. rapa. Syntenic analysis between Arabidopsis and B. rapa was detected at ...

Additional file 12: of Genome-wide identification, phylogeny, evolution, and expression patterns of MtN3/saliva/SWEET genes and functional analysis of BcNS in Brassica rapa

Liming Miao (4908292)
Yanxia Lv (503393)
Lijun Kong (503392)
Qizhen Chen (4089988)
Chaoquan Chen (4908295)
Jia Li (160557)
Fanhuan Zeng (4908301)
Shenyun Wang (4908298)
Jianbin Li (312148)
Li Huang (107408)
Jiashu Cao (503396)
Xiaolin Yu (192623)

March 2018

Figure S6. Positive detection of transgenic Chinese cabbage (B. campestris ssp. chinensis var. parac...

Additional file 4: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Table S3. Nucleotide sequences of 47 SWEET genes from B. oleracea and A. thaliana. (XLSX 19 kb

Additional file 3: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Figure S1. Phylogenetic tree of B. oleracea, B. rapa and A. thaliana SWEET proteins. Phylogenetic an...

Additional file 6: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Figure S3. Protein structure of BoSWEETs in B. oleracea. Red rectangles signify the TMHs, and blue a...

Additional file 7: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Figure S4. Conserved domain architecture of the BoSWEET5c and VV14G09070 proteins. (TIF 177 kb

Additional file 2: of Genome-wide analysis of HSP70 family genes in cabbage (Brassica oleracea var. capitata) reveals their involvement in floral development

Henan Su (6700628)
Miaomiao Xing (2157397)
Xing Liu (221084)
Zhiyuan Fang (537089)
Limei Yang (223781)
Mu Zhuang (537090)
Yangyong Zhang (537091)
Yong Wang (12837)
Honghao Lv (800307)

May 2019

Table S2. FPKM values of 52 BoHsp70 genes in various cabbage tissues. (XLS 29 kb

Additional file 2: Table S1. of Genome-wide characterization and expression profiling of PDI family gene reveals function as abiotic and biotic stress tolerance in Chinese cabbage (Brassica rapa ssp. pekinensis)

Md. Kayum (3695992)
Jong-In Park (121860)
Ujjal Nath (3695998)
Gopal Saha (4599547)
Manosh Biswas (3695995)
Hoy-Taek Kim (2839595)
Ill-Sup Nou (121873)

November 2017

Putative cis-elements, more than 6Â bp, were identified in 32 BrPDI genes in Chinese cabbage. Table ...

Additional file 6: of Genome-wide identification, phylogeny, evolution, and expression patterns of MtN3/saliva/SWEET genes and functional analysis of BcNS in Brassica rapa

Liming Miao (4908292)
Yanxia Lv (503393)
Lijun Kong (503392)
Qizhen Chen (4089988)
Chaoquan Chen (4908295)
Jia Li (160557)
Fanhuan Zeng (4908301)
Shenyun Wang (4908298)
Jianbin Li (312148)
Li Huang (107408)
Jiashu Cao (503396)
Xiaolin Yu (192623)

March 2018

Table S4. Secondary structural prediction of theMtN3/saliva/SWEETs proteins of B. rapa. (XLSX 52Â kb

Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang
Shenyun Wang
Fangwei Yu
Jun Tang
Xi Shan
Kan Bao
Li Yu
Hong Wang
Zhangjun Fei
Jianbin Li

January 2019

Abstract Background The SWEET proteins are a group of sugar transporters that play a role in sugar e...

Additional file 2: Table S1. of Molecular and cellular characteristics of hybrid vigour in a commercial hybrid of Chinese cabbage

Natsumi Saeki (3418064)
Takahiro Kawanabe (3418079)
Hua Ying (47308)
Motoki Shimizu (3418073)
Mikiko Kojima (126135)
Hiroshi Abe (1765243)
Keiichi Okazaki (3418076)
Makoto Kaji (3418070)
Jennifer Taylor (16331)
Hitoshi Sakakibara (54098)
W. Peacock (3413774)
Elizabeth Dennis (3418067)
Ryo Fujimoto (43713)

February 2016

Sequences of primers used for quantitative RT-PCR. Table S2. Plant hormone contents in 2 day cotyled...

Additional file 22: of Comprehensive genomic analysis of the CNGC gene family in Brassica oleracea: novel insights into synteny, structures, and transcript profiles

Kaleem Kakar (4590067)
Zarqa Nawaz (1530955)
Khadija Kakar (4590073)
Essa Ali (2005486)
Abdulwareth Almoneafy (4590070)
Raqeeb Ullah (4590064)
Xue-liang Ren (4590061)
Qing-Yao Shu (4590058)

November 2017

Cumulative values of expression for Arabidopsis CNGC genes in response to pathogen (biotic) and cold...

Additional file 2: of Comparative analysis of the genetic variability within the Q-type C2H2 zinc-finger transcription factors in the economically important cabbage, canola and Chinese cabbage genomes

Susan Lawrence (5424698)
Nicole Novak (5424695)

September 2018

Alignment of Q-type-ZFP proteins from Brassica oleracea, B. rapa and B. napus by group. (PDF 79 kb

Additional file 8: of Genome-wide identification, phylogeny, evolution, and expression patterns of MtN3/saliva/SWEET genes and functional analysis of BcNS in Brassica rapa

Liming Miao (4908292)
Yanxia Lv (503393)
Lijun Kong (503392)
Qizhen Chen (4089988)
Chaoquan Chen (4908295)
Jia Li (160557)
Fanhuan Zeng (4908301)
Shenyun Wang (4908298)
Jianbin Li (312148)
Li Huang (107408)
Jiashu Cao (503396)
Xiaolin Yu (192623)

March 2018

Table S6. Protein subcellular localization prediction of MtN3/saliva/SWEETs proteins in B. rapa. (XL...

Additional file 3: of Transcriptome profiling of two contrasting ornamental cabbage (Brassica oleracea var. acephala) lines provides insights into purple and white inner leaf pigmentation

Si-Won Jin (5940566)
Md Rahim (3777268)
Khandker Afrin (5940575)
Jong-In Park (121860)
Jong-Goo Kang (5940578)
Ill-Sup Nou (121873)

November 2018

Table S3. Transcription factor (TF) families identified in two ornamental cabbage lines. (XLSX 98 kb

Additional file 2: of Genome-wide analysis and stress-responsive expression of CCCH zinc finger family genes in Brassica rapa

Boyi Pi (6158561)
Xinghui He (6158564)
Ying Ruan (6158567)
Jyan-Chyun Jang (3179142)
Yong Huang (15745)

December 2018

CCCH duplicated genes of B. rapa. Syntenic analysis between Arabidopsis and B. rapa was detected at ...

Additional file 12: of Genome-wide identification, phylogeny, evolution, and expression patterns of MtN3/saliva/SWEET genes and functional analysis of BcNS in Brassica rapa

Liming Miao (4908292)
Yanxia Lv (503393)
Lijun Kong (503392)
Qizhen Chen (4089988)
Chaoquan Chen (4908295)
Jia Li (160557)
Fanhuan Zeng (4908301)
Shenyun Wang (4908298)
Jianbin Li (312148)
Li Huang (107408)
Jiashu Cao (503396)
Xiaolin Yu (192623)

March 2018

Figure S6. Positive detection of transgenic Chinese cabbage (B. campestris ssp. chinensis var. parac...

Additional file 4: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Table S3. Nucleotide sequences of 47 SWEET genes from B. oleracea and A. thaliana. (XLSX 19 kb

Additional file 3: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Figure S1. Phylogenetic tree of B. oleracea, B. rapa and A. thaliana SWEET proteins. Phylogenetic an...

Additional file 6: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Figure S3. Protein structure of BoSWEETs in B. oleracea. Red rectangles signify the TMHs, and blue a...

Additional file 7: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang (405)
Shenyun Wang (4908298)
Fangwei Yu (401152)
Jun Tang (32983)
Xi Shan (6275843)
Kan Bao (5926043)
Li Yu (81651)
Hong Wang (13528)
Zhangjun Fei (14143)
Jianbin Li (312148)

January 2019

Figure S4. Conserved domain architecture of the BoSWEET5c and VV14G09070 proteins. (TIF 177 kb

Additional file 2: of Genome-wide analysis of HSP70 family genes in cabbage (Brassica oleracea var. capitata) reveals their involvement in floral development

Henan Su (6700628)
Miaomiao Xing (2157397)
Xing Liu (221084)
Zhiyuan Fang (537089)
Limei Yang (223781)
Mu Zhuang (537090)
Yangyong Zhang (537091)
Yong Wang (12837)
Honghao Lv (800307)

May 2019

Table S2. FPKM values of 52 BoHsp70 genes in various cabbage tissues. (XLS 29 kb

Additional file 2: Table S1. of Genome-wide characterization and expression profiling of PDI family gene reveals function as abiotic and biotic stress tolerance in Chinese cabbage (Brassica rapa ssp. pekinensis)

Md. Kayum (3695992)
Jong-In Park (121860)
Ujjal Nath (3695998)
Gopal Saha (4599547)
Manosh Biswas (3695995)
Hoy-Taek Kim (2839595)
Ill-Sup Nou (121873)

November 2017

Putative cis-elements, more than 6Â bp, were identified in 32 BrPDI genes in Chinese cabbage. Table ...

Additional file 6: of Genome-wide identification, phylogeny, evolution, and expression patterns of MtN3/saliva/SWEET genes and functional analysis of BcNS in Brassica rapa

Liming Miao (4908292)
Yanxia Lv (503393)
Lijun Kong (503392)
Qizhen Chen (4089988)
Chaoquan Chen (4908295)
Jia Li (160557)
Fanhuan Zeng (4908301)
Shenyun Wang (4908298)
Jianbin Li (312148)
Li Huang (107408)
Jiashu Cao (503396)
Xiaolin Yu (192623)

March 2018

Table S4. Secondary structural prediction of theMtN3/saliva/SWEETs proteins of B. rapa. (XLSX 52Â kb

Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Wei Zhang
Shenyun Wang
Fangwei Yu
Jun Tang
Xi Shan
Kan Bao
Li Yu
Hong Wang
Zhangjun Fei
Jianbin Li

January 2019

Abstract Background The SWEET proteins are a group of sugar transporters that play a role in sugar e...

Additional file 2: Table S1. of Molecular and cellular characteristics of hybrid vigour in a commercial hybrid of Chinese cabbage

Natsumi Saeki (3418064)
Takahiro Kawanabe (3418079)
Hua Ying (47308)
Motoki Shimizu (3418073)
Mikiko Kojima (126135)
Hiroshi Abe (1765243)
Keiichi Okazaki (3418076)
Makoto Kaji (3418070)
Jennifer Taylor (16331)
Hitoshi Sakakibara (54098)
W. Peacock (3413774)
Elizabeth Dennis (3418067)
Ryo Fujimoto (43713)

February 2016

Sequences of primers used for quantitative RT-PCR. Table S2. Plant hormone contents in 2 day cotyled...

Additional file 22: of Comprehensive genomic analysis of the CNGC gene family in Brassica oleracea: novel insights into synteny, structures, and transcript profiles

Kaleem Kakar (4590067)
Zarqa Nawaz (1530955)
Khadija Kakar (4590073)
Essa Ali (2005486)
Abdulwareth Almoneafy (4590070)
Raqeeb Ullah (4590064)
Xue-liang Ren (4590061)
Qing-Yao Shu (4590058)

November 2017

Cumulative values of expression for Arabidopsis CNGC genes in response to pathogen (biotic) and cold...

Additional file 2: of Comparative analysis of the genetic variability within the Q-type C2H2 zinc-finger transcription factors in the economically important cabbage, canola and Chinese cabbage genomes

Susan Lawrence (5424698)
Nicole Novak (5424695)

September 2018

Alignment of Q-type-ZFP proteins from Brassica oleracea, B. rapa and B. napus by group. (PDF 79 kb

Additional file 8: of Genome-wide identification, phylogeny, evolution, and expression patterns of MtN3/saliva/SWEET genes and functional analysis of BcNS in Brassica rapa

Liming Miao (4908292)
Yanxia Lv (503393)
Lijun Kong (503392)
Qizhen Chen (4089988)
Chaoquan Chen (4908295)
Jia Li (160557)
Fanhuan Zeng (4908301)
Shenyun Wang (4908298)
Jianbin Li (312148)
Li Huang (107408)
Jiashu Cao (503396)
Xiaolin Yu (192623)

March 2018

Table S6. Protein subcellular localization prediction of MtN3/saliva/SWEETs proteins in B. rapa. (XL...

Additional file 3: of Transcriptome profiling of two contrasting ornamental cabbage (Brassica oleracea var. acephala) lines provides insights into purple and white inner leaf pigmentation

Si-Won Jin (5940566)
Md Rahim (3777268)
Khandker Afrin (5940575)
Jong-In Park (121860)
Jong-Goo Kang (5940578)
Ill-Sup Nou (121873)

November 2018

Table S3. Transcription factor (TF) families identified in two ornamental cabbage lines. (XLSX 98 kb

Additional file 2: of Genome-wide analysis and stress-responsive expression of CCCH zinc finger family genes in Brassica rapa

Boyi Pi (6158561)
Xinghui He (6158564)
Ying Ruan (6158567)
Jyan-Chyun Jang (3179142)
Yong Huang (15745)

December 2018

CCCH duplicated genes of B. rapa. Syntenic analysis between Arabidopsis and B. rapa was detected at ...

Additional file 12: of Genome-wide identification, phylogeny, evolution, and expression patterns of MtN3/saliva/SWEET genes and functional analysis of BcNS in Brassica rapa

Liming Miao (4908292)
Yanxia Lv (503393)
Lijun Kong (503392)
Qizhen Chen (4089988)
Chaoquan Chen (4908295)
Jia Li (160557)
Fanhuan Zeng (4908301)
Shenyun Wang (4908298)
Jianbin Li (312148)
Li Huang (107408)
Jiashu Cao (503396)
Xiaolin Yu (192623)

March 2018

Figure S6. Positive detection of transgenic Chinese cabbage (B. campestris ssp. chinensis var. parac...

Additional file 2: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Abstract

Extracted data

Additional file 2: of Genome-wide characterization and expression profiling of SWEET genes in cabbage (Brassica oleracea var. capitata L.) reveal their roles in chilling and clubroot disease responses

Abstract

Extracted data

Related items

Related items