A listing of 1986 putative conserved sORFs predicted. This file contains a list of 1986 putative conserved sORFs predicted from all fungal genomes that can be viewed using Microsoft excel or text viewer. (TXT 151 kb
Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...
List of non-redundant organisms in the analysis. Non-redundant genomes were selected based on their ...
Complete predictions. List of genes predicted to have IRESs, including the GI identifier, gene name,...
List of predicted sORFs with homologs. This file contains a list of sORFs predicted from all fungal ...
Pseudocode for sORFs workflow. This file contains a pseudocode for finding sORFs workflow using Linu...
Abstract Background Small open reading frames (smORF/sORFs) that encode short protein sequences are ...
Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb
Additional file 1: Conserved pairs. Column 1 and 2 contain the pair of genes, column 3 the probabili...
Numbers of ABC protein-encoding genes in the analyzed species of fungi. (XLSX 16 kb
Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...
Phylogeny of nine fungal species used for the detection of highly conserved nucleotide elements. The...
Phylogeny and comparative genomics of clavicipitaceous fungi Ab, MAC, and MR. (PDF 1319Â kb
Additional file 3. File 1. This file lists the association between the gene and the article mentioni...
Table S2. Full description of the different KEPs identified in the pipeline. (PDF 260 kb
Table S2. Lists of fungal CLO/PXG-like sequences. A list of the 844 sequenced fungal genomes analyse...
Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...
List of non-redundant organisms in the analysis. Non-redundant genomes were selected based on their ...
Complete predictions. List of genes predicted to have IRESs, including the GI identifier, gene name,...
List of predicted sORFs with homologs. This file contains a list of sORFs predicted from all fungal ...
Pseudocode for sORFs workflow. This file contains a pseudocode for finding sORFs workflow using Linu...
Abstract Background Small open reading frames (smORF/sORFs) that encode short protein sequences are ...
Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb
Additional file 1: Conserved pairs. Column 1 and 2 contain the pair of genes, column 3 the probabili...
Numbers of ABC protein-encoding genes in the analyzed species of fungi. (XLSX 16 kb
Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...
Phylogeny of nine fungal species used for the detection of highly conserved nucleotide elements. The...
Phylogeny and comparative genomics of clavicipitaceous fungi Ab, MAC, and MR. (PDF 1319Â kb
Additional file 3. File 1. This file lists the association between the gene and the article mentioni...
Table S2. Full description of the different KEPs identified in the pipeline. (PDF 260 kb
Table S2. Lists of fungal CLO/PXG-like sequences. A list of the 844 sequenced fungal genomes analyse...
Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...
List of non-redundant organisms in the analysis. Non-redundant genomes were selected based on their ...
Complete predictions. List of genes predicted to have IRESs, including the GI identifier, gene name,...
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