List of predicted sORFs with homologs. This file contains a list of sORFs predicted from all fungal genomes with their homologs that can be viewed using Microsoft excel or a text viewer. (TXT 118 kb
Complete predictions. List of genes predicted to have IRESs, including the GI identifier, gene name,...
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
Statistically significant overâ/under-representation of pfam functional annotations between pathog...
A listing of 1986 putative conserved sORFs predicted. This file contains a list of 1986 putative con...
Pseudocode for sORFs workflow. This file contains a pseudocode for finding sORFs workflow using Linu...
Abstract Background Small open reading frames (smORF/sORFs) that encode short protein sequences are ...
Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb
Table S2. Full description of the different KEPs identified in the pipeline. (PDF 260 kb
Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...
Sequences and coordinates of the predicted proteins and transcripts of A. westerdijkiae. (ZIP 10770Â...
Table S2. Lists of fungal CLO/PXG-like sequences. A list of the 844 sequenced fungal genomes analyse...
Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...
Additional file 1: Conserved pairs. Column 1 and 2 contain the pair of genes, column 3 the probabili...
Table S1. Gene predictions of various programs. Table S2. Reference genomes for comparative analysis...
Phylogeny and comparative genomics of clavicipitaceous fungi Ab, MAC, and MR. (PDF 1319Â kb
Complete predictions. List of genes predicted to have IRESs, including the GI identifier, gene name,...
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
Statistically significant overâ/under-representation of pfam functional annotations between pathog...
A listing of 1986 putative conserved sORFs predicted. This file contains a list of 1986 putative con...
Pseudocode for sORFs workflow. This file contains a pseudocode for finding sORFs workflow using Linu...
Abstract Background Small open reading frames (smORF/sORFs) that encode short protein sequences are ...
Table S1. Overall description of the species identified in the pipeline. (XLSX 65 kb
Table S2. Full description of the different KEPs identified in the pipeline. (PDF 260 kb
Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...
Sequences and coordinates of the predicted proteins and transcripts of A. westerdijkiae. (ZIP 10770Â...
Table S2. Lists of fungal CLO/PXG-like sequences. A list of the 844 sequenced fungal genomes analyse...
Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...
Additional file 1: Conserved pairs. Column 1 and 2 contain the pair of genes, column 3 the probabili...
Table S1. Gene predictions of various programs. Table S2. Reference genomes for comparative analysis...
Phylogeny and comparative genomics of clavicipitaceous fungi Ab, MAC, and MR. (PDF 1319Â kb
Complete predictions. List of genes predicted to have IRESs, including the GI identifier, gene name,...
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
Statistically significant overâ/under-representation of pfam functional annotations between pathog...
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