The bacterial OTUs that could not be assigned to a genus are represented as “Unclassified” and are assigned to their family level. The grey line and arrows highlight the conversion in log2-fold change from negative to positive values. [A] Comparing Cheyenne Menthol Box (CMB) to Cheyenne Full Flavor (CFF) tobacco samples. A positive log2-fold change value denotes an OTU that is significantly higher in CFF, while a negative log2-fold change indicates an OTU that is significantly higher in CMB. [B] Comparing Swisher sweets cherry (SSC) to Swisher sweets original (SSO) tobacco samples. A positive log2-fold change value denotes an OTU that is significantly higher in SSO, while a negative log2-fold change indicates an OTU that is significantly hi...
<p>Relative abundances of bacterial genera and phyla that differed significantly between PCOS patien...
<p>Differentially abundant OTUs having a median abundance > 0.1% in at least one group of samples ha...
X-axis reports the log2 ratio (REN/HF) of relative abundances; Y-axis depicts the–log10(p-value) of ...
[A] Relative abundance of top 20 bacterial genera present in tobacco and wrapper samples. [B] Differ...
The plots shows the log2-fold changes for genus-level bacterial OTUs that were statistically signifi...
<p>Differentially abundant genera having a median abundance > 0.1% in at least one group of samples ...
Only bacterial genera that were significantly different between groups after adjusting for multiple ...
For ANCOM procedure, the clr (centered log ratio) table of ASVs grouped by genera was used, which wa...
For ANCOM procedure, the clr (centered log ratio) table of ASVs grouped by genera was used, which wa...
Violin plots showing alpha diversity (Observed number of species and Shannon Index) [A] across all s...
<p>Negative fold change scores (log2) indicate genera with decreased abundance in AMD-positive sampl...
<p>“10y”, “21y”, and “55y” stand for 3 black pepper orchards with 10, 21, and 55 years’ succession c...
<p>Y-axis was transformed by taking the base ten logarithm of the number of reads plus one. Samples ...
Samples containing an ‘l’ character in their names contain species in various abundances, whereas sa...
<p>Box plot showing the relative abundance of the bacterial genera shared by all samples, represente...
<p>Relative abundances of bacterial genera and phyla that differed significantly between PCOS patien...
<p>Differentially abundant OTUs having a median abundance > 0.1% in at least one group of samples ha...
X-axis reports the log2 ratio (REN/HF) of relative abundances; Y-axis depicts the–log10(p-value) of ...
[A] Relative abundance of top 20 bacterial genera present in tobacco and wrapper samples. [B] Differ...
The plots shows the log2-fold changes for genus-level bacterial OTUs that were statistically signifi...
<p>Differentially abundant genera having a median abundance > 0.1% in at least one group of samples ...
Only bacterial genera that were significantly different between groups after adjusting for multiple ...
For ANCOM procedure, the clr (centered log ratio) table of ASVs grouped by genera was used, which wa...
For ANCOM procedure, the clr (centered log ratio) table of ASVs grouped by genera was used, which wa...
Violin plots showing alpha diversity (Observed number of species and Shannon Index) [A] across all s...
<p>Negative fold change scores (log2) indicate genera with decreased abundance in AMD-positive sampl...
<p>“10y”, “21y”, and “55y” stand for 3 black pepper orchards with 10, 21, and 55 years’ succession c...
<p>Y-axis was transformed by taking the base ten logarithm of the number of reads plus one. Samples ...
Samples containing an ‘l’ character in their names contain species in various abundances, whereas sa...
<p>Box plot showing the relative abundance of the bacterial genera shared by all samples, represente...
<p>Relative abundances of bacterial genera and phyla that differed significantly between PCOS patien...
<p>Differentially abundant OTUs having a median abundance > 0.1% in at least one group of samples ha...
X-axis reports the log2 ratio (REN/HF) of relative abundances; Y-axis depicts the–log10(p-value) of ...