Table S3. Composition of mock bacterial communities based on culturable endophytic isolates from cacao. In this table, one can see all the combinations of individual isolates used to compose the MBCs for the actual (post assembly, prior to PCR) communities, including all number of OTUs assessed (i.e., 5, 10, 15, 20, 25 and 30 OTUs). The information on this table is relevant for a better understanding of data shown in Figs. 3 and 4. (DOCX 88 kb
Rarefaction curves of 16S rRNA genes and ITS sequences. (a), (c) and (e) are the rarefaction curves ...
Table S1. Sample and processing details. Composite samples were obtained from multiple plants that w...
Venn diagram of the shared operational taxonomic units (OTUs) of the bacterial (a) and fungal (b) co...
Table S1. Approximate identification of culturable endophytic bacterial isolates from cacao, based o...
Abstract Background Subunits of ribosomal RNA genes (rDNAs) characterized by PCR-based protocols hav...
Table S2. Selected bacterial endophytes for in silico restriction analysis of V5–V9 region of 16S rD...
Figure S6. Taxonomic composition of bacterial mock community samples pre-filtering (a) and post-filt...
Figure S1. Schematic representation of the hybridization capture method. Figure S2. Mock community p...
Mean abundance across samples of 25 most abundant OTUs in negative control samples. Table listing th...
Figure S1. Effect of primary filters on the number of reads. Figure S2. Insert size distribution. Fi...
The classification of the bacteria detected in each sample of natural DCXC at the genus level. CT, l...
Species abundance in mock staggered community. Table S2. DNA concentration in mock staggered communi...
Table S2. Table with the proportions of fungal DNA of pure cultures of six grapevine trunk pathogens...
Bray-Curtis similarities between MBRA communities and their fecal samples determined from OTUs of di...
The classification of the fungi detected in each sample of natural DCXC at the genus level. CT, larv...
Rarefaction curves of 16S rRNA genes and ITS sequences. (a), (c) and (e) are the rarefaction curves ...
Table S1. Sample and processing details. Composite samples were obtained from multiple plants that w...
Venn diagram of the shared operational taxonomic units (OTUs) of the bacterial (a) and fungal (b) co...
Table S1. Approximate identification of culturable endophytic bacterial isolates from cacao, based o...
Abstract Background Subunits of ribosomal RNA genes (rDNAs) characterized by PCR-based protocols hav...
Table S2. Selected bacterial endophytes for in silico restriction analysis of V5–V9 region of 16S rD...
Figure S6. Taxonomic composition of bacterial mock community samples pre-filtering (a) and post-filt...
Figure S1. Schematic representation of the hybridization capture method. Figure S2. Mock community p...
Mean abundance across samples of 25 most abundant OTUs in negative control samples. Table listing th...
Figure S1. Effect of primary filters on the number of reads. Figure S2. Insert size distribution. Fi...
The classification of the bacteria detected in each sample of natural DCXC at the genus level. CT, l...
Species abundance in mock staggered community. Table S2. DNA concentration in mock staggered communi...
Table S2. Table with the proportions of fungal DNA of pure cultures of six grapevine trunk pathogens...
Bray-Curtis similarities between MBRA communities and their fecal samples determined from OTUs of di...
The classification of the fungi detected in each sample of natural DCXC at the genus level. CT, larv...
Rarefaction curves of 16S rRNA genes and ITS sequences. (a), (c) and (e) are the rarefaction curves ...
Table S1. Sample and processing details. Composite samples were obtained from multiple plants that w...
Venn diagram of the shared operational taxonomic units (OTUs) of the bacterial (a) and fungal (b) co...