Figure S4. Comparison of genomic regions overlapping a streptolysin operon. Pairwise BLAST hits shown in red (eâ<â0.001), darker color indicates better alignment. Blue: Streptolysin-associated genes. Grey: Genes outside syntenic operon. Related genes detected by synteny at minimum 26% protein identity (PDF 62 kb
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
Phylogenetic tree based on 16S rDNA depicting the relationships of sequenced strains of Collimonas. ...
Table S1. A Spacer sequneces of type I-C CRISPR identified from all 118 strains. B Spacer sequneces ...
Table S5 Genomes and gene loci used for bacteriocin- and streptolysin S synteny comparison (XLSX 5 k...
Figure S5. Competence genes identified in the pangenome. Gene presence in blue, fragments in light b...
Figure S2. Variable regions in groups C and D genomes. MicroScope RGP-finder was used to identify sp...
Figure S6. Schematic representation of the stop mutation disrupting the malolactic transcriptional r...
Figure S7. Fortified Neighbor Joining phylogram. Calculated from core SNP data with Kimura 2-paramet...
Figure S1. Whole Genome Synteny Dotplot. Sequences of CRBO_1381 and UBOCC-A-315001 were compared aga...
Figure S3. Size of the pangenome at any given number of strains. At every step, 10 combinations of s...
The distinct PTS cellobiose operons and their insertion sites on O. oeni chromosome. The blue arrows...
International audienceOenococcus oeni is a lactic acid bacteria species adapted to the low pH, ethan...
Oenococcus oeni is a lactic acid bacteria species encountered particularly in wine, where it achieve...
Protein multiple sequence alignment used for cladogram construction (related to Fig. 3). (NEX 1505 k...
Oenococcus oeni is a lactic acid bacteria species encountered particularly in wine, where it achieve...
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
Phylogenetic tree based on 16S rDNA depicting the relationships of sequenced strains of Collimonas. ...
Table S1. A Spacer sequneces of type I-C CRISPR identified from all 118 strains. B Spacer sequneces ...
Table S5 Genomes and gene loci used for bacteriocin- and streptolysin S synteny comparison (XLSX 5 k...
Figure S5. Competence genes identified in the pangenome. Gene presence in blue, fragments in light b...
Figure S2. Variable regions in groups C and D genomes. MicroScope RGP-finder was used to identify sp...
Figure S6. Schematic representation of the stop mutation disrupting the malolactic transcriptional r...
Figure S7. Fortified Neighbor Joining phylogram. Calculated from core SNP data with Kimura 2-paramet...
Figure S1. Whole Genome Synteny Dotplot. Sequences of CRBO_1381 and UBOCC-A-315001 were compared aga...
Figure S3. Size of the pangenome at any given number of strains. At every step, 10 combinations of s...
The distinct PTS cellobiose operons and their insertion sites on O. oeni chromosome. The blue arrows...
International audienceOenococcus oeni is a lactic acid bacteria species adapted to the low pH, ethan...
Oenococcus oeni is a lactic acid bacteria species encountered particularly in wine, where it achieve...
Protein multiple sequence alignment used for cladogram construction (related to Fig. 3). (NEX 1505 k...
Oenococcus oeni is a lactic acid bacteria species encountered particularly in wine, where it achieve...
Additional file 3: Operon predictions. Column 1 contains genes, and column 2 contains the operon int...
Phylogenetic tree based on 16S rDNA depicting the relationships of sequenced strains of Collimonas. ...
Table S1. A Spacer sequneces of type I-C CRISPR identified from all 118 strains. B Spacer sequneces ...