Distribution of the SNPs of the Axiom™ 70 K Pear Genotyping Array on the pear genomes. The number of SNPs in 500 Kbp bins was plotted over each chromosome length for the P. communis ‘Bartlett’ v1.1 [32, 54] (on top) and the P. x bretschneideri ‘Dangshansuli’ [55] (on the bottom) genomes. The red dashed lines show the average number of SNPs per bin for each chromosome. The table in the center reports the total number of SNPs uniquely aligned to each chromosome (chr) of the two genomes, as well as those aligned to unanchored scaffolds (0). (PDF 174 kb
BackgroundBoth a source of diversity and the development of genomic tools, such as reference genomes...
Statistics about the parental genetic maps of the F1 population P16.009. The number of markers, the ...
Table S6. Information of new designed 101, 694 SSR primers, including information of the primer sequ...
Comparison of SNP array and GBS data error rate. The total number of Axiom™ 70 K Pear Genotyping Arr...
List of trios used for Mendelian check. A total of 22 trios (two parents, P01 and P02, and one offsp...
Screening panel. The 288 Pyrus accessions screened with the Axiom™ 700 K Pear Genotyping Array. For ...
Parental genetic maps of the F1 population P16.009 constructed with the Axiom™ Pear 70 K Genotyping ...
Principal Component Analysis (PCA) plots of the PC pairs for the first four PCs. (A) PCA performed w...
Cluster plots of an ABvarianceY and an OffTargetVariant SNP of the Axiom™ Pear 700 K Genotyping Arra...
Cluster plots of two OTV SNPs of the Axiom™ Pear 700 K Genotyping Array with samples colored by spec...
Figure S1. |Δ(SNP-index)| graph derived from the modified QTL-seq analysis of mapping for the red sk...
Polymorphism discovery panel. The 55 Pyrus accessions re-sequenced for variant discovery. For each s...
Table S1. Statistics of sequencing data for the crosses MTH × HXS and YLX × MTH. Table S2. Details o...
Explanation of the SnpEff categories for all annotated variants. The number of variants for each typ...
Figure S1. Percentages of different motifs among mono-(a), di- (b) and tri- (c) nucleotide repeats i...
BackgroundBoth a source of diversity and the development of genomic tools, such as reference genomes...
Statistics about the parental genetic maps of the F1 population P16.009. The number of markers, the ...
Table S6. Information of new designed 101, 694 SSR primers, including information of the primer sequ...
Comparison of SNP array and GBS data error rate. The total number of Axiom™ 70 K Pear Genotyping Arr...
List of trios used for Mendelian check. A total of 22 trios (two parents, P01 and P02, and one offsp...
Screening panel. The 288 Pyrus accessions screened with the Axiom™ 700 K Pear Genotyping Array. For ...
Parental genetic maps of the F1 population P16.009 constructed with the Axiom™ Pear 70 K Genotyping ...
Principal Component Analysis (PCA) plots of the PC pairs for the first four PCs. (A) PCA performed w...
Cluster plots of an ABvarianceY and an OffTargetVariant SNP of the Axiom™ Pear 700 K Genotyping Arra...
Cluster plots of two OTV SNPs of the Axiom™ Pear 700 K Genotyping Array with samples colored by spec...
Figure S1. |Δ(SNP-index)| graph derived from the modified QTL-seq analysis of mapping for the red sk...
Polymorphism discovery panel. The 55 Pyrus accessions re-sequenced for variant discovery. For each s...
Table S1. Statistics of sequencing data for the crosses MTH × HXS and YLX × MTH. Table S2. Details o...
Explanation of the SnpEff categories for all annotated variants. The number of variants for each typ...
Figure S1. Percentages of different motifs among mono-(a), di- (b) and tri- (c) nucleotide repeats i...
BackgroundBoth a source of diversity and the development of genomic tools, such as reference genomes...
Statistics about the parental genetic maps of the F1 population P16.009. The number of markers, the ...
Table S6. Information of new designed 101, 694 SSR primers, including information of the primer sequ...