Additional file 4: of Development of Three Sets of High-Throughput Genotyped Rice Chromosome Segment Substitution Lines and QTL Mapping for Eleven Traits

Figure S2. Sequence difference and phenotypic variations on four reported genes. A. Difference sites between the related two parents. The difference sites are shown in red. Amino acids variations are listed in parenthesis. Empty blocks and blue blocks represent non-coding regions and exons, respectively. B-E. Phenotypic variation between CSSLs individuals and their recurrent parents. B. CSSL-A9 and CSSL-A53 harbor Lax1 of PA64s allele at qSPB1–2 locus. C. CSSL-C19 harbors Sd1 of PA64s allele at qPH1–2 locus. D. CSSL-B35 and CSSL-B36 harbor GW5 of Nipponbare allele at qGW5 locus. E. CSSL-B10 harbors Nal1 of Nipponbare allele at qFLW4 locus. Error bars are s.d. * and ** indicate the least significant difference at 0.05 and 0.01 probability level compared with the recurrent parent in SZ or HZ, respectively. NPB represents Nipponbare. (TIF 211 kb